| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864468
Identifier: 33864468
GI number: 33864468
Start: 2330107
End: 2331216
Strand: Direct
Name: 33864468
Synonym: PMT2204
Alternate gene names: NA
Gene position: 2330107-2331216 (Clockwise)
Preceding gene: 33864467
Following gene: 33864472
Centisome position: 96.65
GC content: 55.59
Gene sequence:
>1110_bases ATGTCTCATCGTCTCTTCAATCGGCCCAAGTTTTTACTTCTAGCGCTCCTACTTGCTCCAACAACGCTTGATGCCACCTT CTGCCGCCCCAGCTTTGCAGGTGGCAACCATGGCGGCGGTGGCGCAGAAGCGCTAGAGGCAGGTGAATTTCGTACATCAC CCGTTCTCACCATCGAAGGCCATGGAGGGTTCGAAACCAACCTCGATGGCAGCCCGGAGCACTACGCCATCGATGGTTTG TTTGGCGTAGTGATGGAGTGGGGTCTTGGCAATAACGGTAGCTTCGCGATTGAAGCCGCCATTGGTCCAGCCCTGGTGTG GGGTGAAGCAGAGCACTTTTACGGCAAGGTTCATGTTGATGAGCATGACGAAGAGACGGATAGCCATAGCGACGATGACC ATGCCGAGCATGACGATGACCATGACGACCATGGCGAGGAGCATGACGACGACCATGCCGAGCATGACGATGACCATGAC GACCATGGCGAGGAGCATGACGACGACCATGCCGAGCATGACGATGACGATGAGCATGCTGGCCATGGGTCCCATGACAC CGACTACAAGCGCTCCGATGTCCGCGGTTTCCTACAGGCGCGCTATGCCCCTAACGATCGCCTAAGCCTGTCGGTCTCTT GGAATCCCTACTACGTCACCAAGGATCAAGGCGAAGACATTAAGGGTCTGAAGAATGAACTAGGAGCGAAACTAGTTTGG GCACTGGGTGATGGAGATGTCAATTTTGCTCTCGGCGATCGCCTCGAAGACCTGATCGATGGCGTTTATCTCTCTATCGA GCATCGGCAGGGATGGGAATCGGATGGCACATGGATGGGCAACTACACCGATCCCCGTCTTGGAGTCGGTTTCAATGTCG ACCTATTGAACATCAGCCTCAACGCTGGACCACGTTTCTACGTACCGGGCATCTACTCCGGACTCGAACAGCGCACCGAT TTCGCAGGCGAACTGGAAGTTGCATATCCAGTGGGCAACAACACTGTTCTGTTCGCCCACTGGCAGCCCACCTACAGTTC AGAAGGAGGCTCAGGCTGGGGTGAAGGCTGGCAGCACCACATCGGCACCGGCGTCACATTCAGCTTCTAA
Upstream 100 bases:
>100_bases AGGCCGCTGCCGATGAACTGATGGCGCGTTGGTCCGCGATTCGTTGAACAATCAATTTCACCTTTGTTGGATCCCTTTCA ATTCATTCCTACACAAACCA
Downstream 100 bases:
>100_bases GCCAACAGCGATAGATCACCCTGCGGACAACCAAAGTGCCTCCTTAATTCGTATTGGCAATACCTTGAGCCATTCAAGCG TGGTGGCATCCATCAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSHRLFNRPKFLLLALLLAPTTLDATFCRPSFAGGNHGGGGAEALEAGEFRTSPVLTIEGHGGFETNLDGSPEHYAIDGL FGVVMEWGLGNNGSFAIEAAIGPALVWGEAEHFYGKVHVDEHDEETDSHSDDDHAEHDDDHDDHGEEHDDDHAEHDDDHD DHGEEHDDDHAEHDDDDEHAGHGSHDTDYKRSDVRGFLQARYAPNDRLSLSVSWNPYYVTKDQGEDIKGLKNELGAKLVW ALGDGDVNFALGDRLEDLIDGVYLSIEHRQGWESDGTWMGNYTDPRLGVGFNVDLLNISLNAGPRFYVPGIYSGLEQRTD FAGELEVAYPVGNNTVLFAHWQPTYSSEGGSGWGEGWQHHIGTGVTFSF
Sequences:
>Translated_369_residues MSHRLFNRPKFLLLALLLAPTTLDATFCRPSFAGGNHGGGGAEALEAGEFRTSPVLTIEGHGGFETNLDGSPEHYAIDGL FGVVMEWGLGNNGSFAIEAAIGPALVWGEAEHFYGKVHVDEHDEETDSHSDDDHAEHDDDHDDHGEEHDDDHAEHDDDHD DHGEEHDDDHAEHDDDDEHAGHGSHDTDYKRSDVRGFLQARYAPNDRLSLSVSWNPYYVTKDQGEDIKGLKNELGAKLVW ALGDGDVNFALGDRLEDLIDGVYLSIEHRQGWESDGTWMGNYTDPRLGVGFNVDLLNISLNAGPRFYVPGIYSGLEQRTD FAGELEVAYPVGNNTVLFAHWQPTYSSEGGSGWGEGWQHHIGTGVTFSF >Mature_368_residues SHRLFNRPKFLLLALLLAPTTLDATFCRPSFAGGNHGGGGAEALEAGEFRTSPVLTIEGHGGFETNLDGSPEHYAIDGLF GVVMEWGLGNNGSFAIEAAIGPALVWGEAEHFYGKVHVDEHDEETDSHSDDDHAEHDDDHDDHGEEHDDDHAEHDDDHDD HGEEHDDDHAEHDDDDEHAGHGSHDTDYKRSDVRGFLQARYAPNDRLSLSVSWNPYYVTKDQGEDIKGLKNELGAKLVWA LGDGDVNFALGDRLEDLIDGVYLSIEHRQGWESDGTWMGNYTDPRLGVGFNVDLLNISLNAGPRFYVPGIYSGLEQRTDF AGELEVAYPVGNNTVLFAHWQPTYSSEGGSGWGEGWQHHIGTGVTFSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40673; Mature: 40542
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRLFNRPKFLLLALLLAPTTLDATFCRPSFAGGNHGGGGAEALEAGEFRTSPVLTIEG CCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEC HGGFETNLDGSPEHYAIDGLFGVVMEWGLGNNGSFAIEAAIGPALVWGEAEHFYGKVHVD CCCEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHEEEEEEEC EHDEETDSHSDDDHAEHDDDHDDHGEEHDDDHAEHDDDHDDHGEEHDDDHAEHDDDDEHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHGSHDTDYKRSDVRGFLQARYAPNDRLSLSVSWNPYYVTKDQGEDIKGLKNELGAKLVW CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCEEEE ALGDGDVNFALGDRLEDLIDGVYLSIEHRQGWESDGTWMGNYTDPRLGVGFNVDLLNISL EECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE NAGPRFYVPGIYSGLEQRTDFAGELEVAYPVGNNTVLFAHWQPTYSSEGGSGWGEGWQHH CCCCEEECCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHH IGTGVTFSF CCCCEEECC >Mature Secondary Structure SHRLFNRPKFLLLALLLAPTTLDATFCRPSFAGGNHGGGGAEALEAGEFRTSPVLTIEG CCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEC HGGFETNLDGSPEHYAIDGLFGVVMEWGLGNNGSFAIEAAIGPALVWGEAEHFYGKVHVD CCCEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCHHHEEEEEEEC EHDEETDSHSDDDHAEHDDDHDDHGEEHDDDHAEHDDDHDDHGEEHDDDHAEHDDDDEHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GHGSHDTDYKRSDVRGFLQARYAPNDRLSLSVSWNPYYVTKDQGEDIKGLKNELGAKLVW CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCCEEEE ALGDGDVNFALGDRLEDLIDGVYLSIEHRQGWESDGTWMGNYTDPRLGVGFNVDLLNISL EECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE NAGPRFYVPGIYSGLEQRTDFAGELEVAYPVGNNTVLFAHWQPTYSSEGGSGWGEGWQHH CCCCEEECCHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHH IGTGVTFSF CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA