| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864418
Identifier: 33864418
GI number: 33864418
Start: 2274537
End: 2275103
Strand: Direct
Name: 33864418
Synonym: PMT2154
Alternate gene names: NA
Gene position: 2274537-2275103 (Clockwise)
Preceding gene: 33864417
Following gene: 33864419
Centisome position: 94.34
GC content: 48.85
Gene sequence:
>567_bases ATGTGGGGACAAGAGCCTCAACTTCAGCGAGTCCGCGAGCGACTGAAGTTACTGCTGTCGACCCACGCCAATGCACTCCA TCCCAAAACCTTGTATGCCAAGCCAGGAGAGCTGCTCCTCAAGCAAGACGCGCCAGCCAAGCACCTGCTTCTACTGACTC AAGGAAAGGTGGCGATTGAGATCCAACAACAAGGTCAATCTCCTCACACGCTGACAGTGATAGAAGCCGAAGCATTATTG GGGGAGATGGGCCTATTCGGCGATGGCACCCACTCTGCTGATGTCCGGGTGGTTGATGGACCTGCGGAACTACTCCAAAT CAACGGTAACGATCTACTCAAAGCACTGATCTATGACTCCGAACTGCTGATCGAACTGCTTGCTCTGATGAGTGAGCGTG TCCGCAATACCAATAAGATAATCACATTGCTACTTGATGGAATTAACGGAGCCTGCAAAAGAGATGATATCTTGTTGGAC AAAGCACTCCAAGACTTAAAAAGTCTGAACCAGTTCGTTTCACAAACTGCCGAACAACTGAAACACCACTATAGGAAAAA TGAATAA
Upstream 100 bases:
>100_bases TAAAGGTAAAAAAAGTTTCCCCCCATCAAGCAACCGTTTGCATTGGTTCTGCACGATGTTGCCAGTCATACCAAGATAAT GAAAGCCATCCACAGCAGCC
Downstream 100 bases:
>100_bases CCAAAGAAATCAGTCATTAACAAATGGCATCTTGTTCATAATGGCTTTCAAGTATTAATAGAGCAGCTCGTCAGGTCTAC TCAAAATCAACCAAAGAGAA
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD KALQDLKSLNQFVSQTAEQLKHHYRKNE
Sequences:
>Translated_188_residues MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD KALQDLKSLNQFVSQTAEQLKHHYRKNE >Mature_188_residues MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIEIQQQGQSPHTLTVIEAEALL GEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDSELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLD KALQDLKSLNQFVSQTAEQLKHHYRKNE
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20977; Mature: 20977
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCCEEEEEECCCEEEE IQQQGQSPHTLTVIEAEALLGEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDS EECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEECCHHHHHHHHHCH ELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLDKALQDLKSLNQFVSQTAEQL HHHHHHHHHHHHHHCCHHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KHHYRKNE HHHHCCCC >Mature Secondary Structure MWGQEPQLQRVRERLKLLLSTHANALHPKTLYAKPGELLLKQDAPAKHLLLLTQGKVAIE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCCCCCEEEEEECCCEEEE IQQQGQSPHTLTVIEAEALLGEMGLFGDGTHSADVRVVDGPAELLQINGNDLLKALIYDS EECCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEECCHHHHHHHHHCH ELLIELLALMSERVRNTNKIITLLLDGINGACKRDDILLDKALQDLKSLNQFVSQTAEQL HHHHHHHHHHHHHHCCHHHEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KHHYRKNE HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA