Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864408

Identifier: 33864408

GI number: 33864408

Start: 2258061

End: 2259185

Strand: Direct

Name: 33864408

Synonym: PMT2144

Alternate gene names: NA

Gene position: 2258061-2259185 (Clockwise)

Preceding gene: 33864407

Following gene: 33864409

Centisome position: 93.66

GC content: 47.11

Gene sequence:

>1125_bases
ATGAGCCTGTTTCGAAAAAATGCTCTAGATGCATTATCCAGCCCTGAACAACTAGACCAGCCTCTTGAATTGCTCAGACC
AAGTTACTGGCTTTTACTGATCTCACTATTGGGGTTCAGTCTGAGCATTCTGCTGTGGTCAATATTTGGCCGTTTACCCG
TAAGAATCGAAGGACGTGGCGTCTTAGTTAGAACAGAAAACTTACAGTGGGTTCAAAGCGAAATTAATGGCCGCCTCAAA
GAATTCAAGGTTAATGTGGGGGATTGCATCAAGCAAGGAACACCTCTTGCCGTCATTGACCCAGTGCAATTAGAGCTAGA
ACAACAAAAAGCAAACAACCAGCTTGAGATTCTAATCGCCAATGATGCAAGTTTAGACCTCATTGCTATCCAACGGGAAG
ATGAGCTCAGGAAAAGCACAGCACGCTGGAAATTGGCATTTCAAAAGAATGCGGTGAGTCAAGTCGAATGGGATCAAAGA
GTCCAACGACTCTCTGAGCTGTTATACAACCTAGAGACAAGTAACAACCAACGTGAACAATTAATTATTCAGAAACAAAG
CGAAATTGTTGCCCTAGAACAACAAATTGCACGAACAGCAACCGTGAAAGCACCTCAAGCAGGCTGTGTCACCGACCGCC
ATGTCCAATTAGGGCAAGTGGTGCAACCAGGCGTCACACTGTTTGAACTTGAGCGAGACAAAGACGCCAATACGCTTCAA
AGCCTGGCCTTCTTCCCAGCAAAAGATGGTAAACGCCTTCGTATCGGTCAACCAGTTCGCGTGACACCAACAACGACCAA
AGCACAACGCCATGGTGGCATCGAAGCTGAAATCCTCAAAGTGCGTCGTTTACCAGTCAGCAAAGAGGCCGTCATCAATC
GGCTCTACAACAAAGAATCACTGTTCAAGGCCATAAATACCGAAGACGAAGGTCCACTGATCGAAGTCGCCACGTCCTTA
GCCAAAGACCCAACAACACCTAGCGGTTATGACTGGGGCGGCAGCAAAGGACCAGACCTACAGCTCACAGCAGGCACACC
AACAACGCTGAGAGTGCTTGTAGAGCAAAGGCGACCAATCAGCTATGTGATCCCTCTATTGAGAAATCTCAGTGGGATCT
ACTGA

Upstream 100 bases:

>100_bases
TTATTGTGCTGGAGAAAGGTCAAGTCCAGCAACAAGGCACATTCGAAAGTCTGATGAATGAAGCTGGGCTATTTGCCCGC
TTAATGGAGAGGCAGGTTGC

Downstream 100 bases:

>100_bases
GGGATATAAGACATGAACCTGCAGCCTTTCTGTCGTCAACTCTGGATCCGCATCCAAGCTCGTCTCAGCAAGCAGTGGGT
ACGTACCCCAACATTGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Secretion Protein HlyD Family Protein; Type I Secretion Adaptor Protein; RND Membrane Fusion Protein; Chromosome Segregation ATPase-Like Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSLFRKNALDALSSPEQLDQPLELLRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRGVLVRTENLQWVQSEINGRLK
EFKVNVGDCIKQGTPLAVIDPVQLELEQQKANNQLEILIANDASLDLIAIQREDELRKSTARWKLAFQKNAVSQVEWDQR
VQRLSELLYNLETSNNQREQLIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHVQLGQVVQPGVTLFELERDKDANTLQ
SLAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEILKVRRLPVSKEAVINRLYNKESLFKAINTEDEGPLIEVATSL
AKDPTTPSGYDWGGSKGPDLQLTAGTPTTLRVLVEQRRPISYVIPLLRNLSGIY

Sequences:

>Translated_374_residues
MSLFRKNALDALSSPEQLDQPLELLRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRGVLVRTENLQWVQSEINGRLK
EFKVNVGDCIKQGTPLAVIDPVQLELEQQKANNQLEILIANDASLDLIAIQREDELRKSTARWKLAFQKNAVSQVEWDQR
VQRLSELLYNLETSNNQREQLIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHVQLGQVVQPGVTLFELERDKDANTLQ
SLAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEILKVRRLPVSKEAVINRLYNKESLFKAINTEDEGPLIEVATSL
AKDPTTPSGYDWGGSKGPDLQLTAGTPTTLRVLVEQRRPISYVIPLLRNLSGIY
>Mature_373_residues
SLFRKNALDALSSPEQLDQPLELLRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRGVLVRTENLQWVQSEINGRLKE
FKVNVGDCIKQGTPLAVIDPVQLELEQQKANNQLEILIANDASLDLIAIQREDELRKSTARWKLAFQKNAVSQVEWDQRV
QRLSELLYNLETSNNQREQLIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHVQLGQVVQPGVTLFELERDKDANTLQS
LAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEILKVRRLPVSKEAVINRLYNKESLFKAINTEDEGPLIEVATSLA
KDPTTPSGYDWGGSKGPDLQLTAGTPTTLRVLVEQRRPISYVIPLLRNLSGIY

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42037; Mature: 41906

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFRKNALDALSSPEQLDQPLELLRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRG
CCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCE
VLVRTENLQWVQSEINGRLKEFKVNVGDCIKQGTPLAVIDPVQLELEQQKANNQLEILIA
EEEEECCHHHHHHHHCCCHHEEECCHHHHHHCCCCEEEECHHHHHHHHHCCCCEEEEEEE
NDASLDLIAIQREDELRKSTARWKLAFQKNAVSQVEWDQRVQRLSELLYNLETSNNQREQ
CCCCEEEEEECCHHHHHHHHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHVQLGQVVQPGVTLFELERDKDANTLQ
HEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHH
SLAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEILKVRRLPVSKEAVINRLYNKES
HHHHCCCCCCCEEECCCCEEECCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCHHH
LFKAINTEDEGPLIEVATSLAKDPTTPSGYDWGGSKGPDLQLTAGTPTTLRVLVEQRRPI
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCH
SYVIPLLRNLSGIY
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SLFRKNALDALSSPEQLDQPLELLRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRG
CCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCE
VLVRTENLQWVQSEINGRLKEFKVNVGDCIKQGTPLAVIDPVQLELEQQKANNQLEILIA
EEEEECCHHHHHHHHCCCHHEEECCHHHHHHCCCCEEEECHHHHHHHHHCCCCEEEEEEE
NDASLDLIAIQREDELRKSTARWKLAFQKNAVSQVEWDQRVQRLSELLYNLETSNNQREQ
CCCCEEEEEECCHHHHHHHHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHVQLGQVVQPGVTLFELERDKDANTLQ
HEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHH
SLAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEILKVRRLPVSKEAVINRLYNKES
HHHHCCCCCCCEEECCCCEEECCCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCHHH
LFKAINTEDEGPLIEVATSLAKDPTTPSGYDWGGSKGPDLQLTAGTPTTLRVLVEQRRPI
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCH
SYVIPLLRNLSGIY
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA