| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864405
Identifier: 33864405
GI number: 33864405
Start: 2254282
End: 2255310
Strand: Direct
Name: 33864405
Synonym: PMT2141
Alternate gene names: NA
Gene position: 2254282-2255310 (Clockwise)
Preceding gene: 33864404
Following gene: 33864406
Centisome position: 93.5
GC content: 52.67
Gene sequence:
>1029_bases ATGCACAATGAAATTGTGACTGGAAATGTCTTGCCATTTAACATCTTTGAAAAGGCAGATTCCAAGCTGCTGGCCTGGAT TCGTGATGTCTCTGTCGTAAGGGAAATCACAACCTCCTGTCGTCTGATCGAAGAAGGCAGCACTCCGGACGGCTTGTTTG TAGTTGAGTCAGGAGCAATCACGGTTTGCACCAAGCAAGCTGATGGTGGAAGCTTGTCACTCGCCAGCCTAAAAGTAGGC AACCTGGTGGGAGAGATGAGCTGGCTGGAAGAACGTCCAGCAGTGGCAAGCATTGATGCTGGTCCAGGAAGTCGTCTGCT CCAAATCCCTAGAGAGGCTCTGGAGTCAATCAATCAATCTGAGGCTTTCATTTGCCATCTCCTCTATCGCCTCATCGCTG AAAAACTGGCCCTCCAAGTGCAAGGCCAAAACATATGGGTTCATCGTATTGCCGGGACTGACCAGGAACCCCTCCGCAAA GTTCTGGTGCTATTCGCAGAACTCGAAGAGAAGGATGTGGCCTGGATCGCCAGGTCCGGTAAATTCAAACGTCTTGTCGC TGGAGACGTTCTCCTTCAAGAGGGAGATAATGTGCCTGGCCTCTATCTGCTGCTCGCTGGAGAGGCCAGGATCAGTATCA CTGAAAACGGAAGCTGGCAATCGGTAGGCAGCTCTCGACGCGGTGAACTACTCGGTGAGCTCACAATGCTCAACCCTCAA GCAGCCGGAGCCACCGCCAATGTGGACACAGTCACAGGCCTAGAGCTACTGGTGCTCGACAAAGAGGAACTCAGCATGAC CCTCAACGCAGATCCAAGGCTGGCTAAGCGTTTCTACAAAGGCATCGCACGCATGCTCTCCCAACGCAGCCGTGATCAAC TCCTCAGCCGTGGATTTGCTGAAGCAAGCCGCATAGCCGAGGAACTCATCGACAACGAACAGCTTGGTCTTGATCAACTA TCGGCCATCAGTTCAGCCGGGTTGCGTTTTGACTGGCTGTGCAGACAATTTCAGGACAAGGAGGGCTGA
Upstream 100 bases:
>100_bases TACTTGCAGCATTGACTTGCCACAAAAAGAGCTGTGAGCTTGACAAAAGTTTAAGCAAAGTATCTGAATCTCACCTTCAG GCAAAACAAGGTCCAATCAA
Downstream 100 bases:
>100_bases TGTCTTGAAACTGCTACCCGGTGAAGAGCAACCATGGCCCTCTAACCCTTTGAAGGTTACTGAGGGAGAGATAAGACTGA TCCTTGAGCAACGCTCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL SAISSAGLRFDWLCRQFQDKEG
Sequences:
>Translated_342_residues MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL SAISSAGLRFDWLCRQFQDKEG >Mature_342_residues MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAITVCTKQADGGSLSLASLKVG NLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQSEAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRK VLVLFAELEEKDVAWIARSGKFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFAEASRIAEELIDNEQLGLDQL SAISSAGLRFDWLCRQFQDKEG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37513; Mature: 37513
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAI CCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCEE TVCTKQADGGSLSLASLKVGNLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQS EEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH EAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRKVLVLFAELEEKDVAWIARSG HHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEEECCC KFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ CEEEHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCHHCCCCHHHHHHHHHEEECCC AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFA CCCCCCCCCCCCCEEEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EASRIAEELIDNEQLGLDQLSAISSAGLRFDWLCRQFQDKEG HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MHNEIVTGNVLPFNIFEKADSKLLAWIRDVSVVREITTSCRLIEEGSTPDGLFVVESGAI CCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCEE TVCTKQADGGSLSLASLKVGNLVGEMSWLEERPAVASIDAGPGSRLLQIPREALESINQS EEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCH EAFICHLLYRLIAEKLALQVQGQNIWVHRIAGTDQEPLRKVLVLFAELEEKDVAWIARSG HHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEEECCC KFKRLVAGDVLLQEGDNVPGLYLLLAGEARISITENGSWQSVGSSRRGELLGELTMLNPQ CEEEHHHHHHHEECCCCCCEEEEEEECCEEEEEECCCCCHHCCCCHHHHHHHHHEEECCC AAGATANVDTVTGLELLVLDKEELSMTLNADPRLAKRFYKGIARMLSQRSRDQLLSRGFA CCCCCCCCCCCCCEEEEEEEHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH EASRIAEELIDNEQLGLDQLSAISSAGLRFDWLCRQFQDKEG HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA