| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pgk [H]
Identifier: 33864370
GI number: 33864370
Start: 2219824
End: 2221029
Strand: Reverse
Name: pgk [H]
Synonym: PMT2106
Alternate gene names: 33864370
Gene position: 2221029-2219824 (Counterclockwise)
Preceding gene: 33864374
Following gene: 33864369
Centisome position: 92.13
GC content: 57.63
Gene sequence:
>1206_bases ATGGCGAAGCGTTCACTGTCCAATCTCAGCGCAGCGGACCTACGCAGTAAGCGTGTGCTGGTTCGGGTTGATTTCAACGT GCCTCTCAACGAGAACGGCGCCATTACCGATGACACCCGCATCCGCGCCGCCCTGCCCACCATCAATGACCTGATCGACA AAGGTGCTCGGGTGATCCTCTCAGCCCACTTTGGCCGACCAAAGGGTCAAATCAACGAAGGAATGCGGCTCACACCAGTA GCAAAACGCCTCAGCGAACTGCTGGGTAAAAACGTGACAAAAACCGAAAGCTGCGTTGGTAGCGACGCCGAAGCAAAGGT TAATGCCATGGCCGATGGAGATGTCGTACTGCTCGAGAATGTGCGCTTTTTCTCAGAAGAAGAAAAAAACGACGCCAACT TCGCCCAAAAGCTCGCAGCACTTGCTGACGCTTATGTCAATGACGCCTTCGGTGCTGCACACCGCGCCCACGCCTCTACA GAAGGGGTCACCAAATTCCTCAACCCCAGTGTGGCAGGCCACCTGATGGAGAAGGAACTGCAATACCTGCAAGGTGCCAT CGACGACCCGAAGCGACCCCTTGCAGCGATCGTGGGTGGGTCCAAGGTCAGCAGCAAGATCGGCGTGTTGGAAGCCTTGA TCGACAAGTGCGACAAGGTGCTGATCGGCGGCGGCATGATCTTCACGTTCTACAAAGCGCGTGGCCTTTCAGTCGGCAAG AGCCTGGTGGAAGAAGACAAGTTAGAGCTGGCCAAGGAGCTAGAGGCCAAGGCGAAGGCCAAGGGGGTTCAACTGCTTCT GCCCACTGACGTTGTGCTAGCCGATGACTTCGCCCCCGCCGCCAATAGCCAGACCGTATCCATCGACGCCATTCCCGATG GTTGGATGGGACTGGACATTGGCCCCGACTCAATCAATCTCTTCCAAGACGCACTGGCTGACTGCCAAACCGTGATCTGG AACGGCCCCATGGGCGTGTTCGAGTTCGATAAGTTTGCCGCCGGCACCAACGCCATCGCCACAACCTTGGCGGACCTCAG TGGCAAGGGTTGCTGCACAATTATTGGTGGTGGTGACTCCGTAGCTGCTGTTGAGAAGGCCGGCCTCGCCGAGAAGATGT CCCACATCTCCACCGGTGGTGGCGCCAGCCTTGAGCTGCTGGAAGGCAAGGTGTTGCCAGGTGTCGCCGCTCTCGACGAC GCCTAA
Upstream 100 bases:
>100_bases TAGCGCCAACCAGATCAGTGCGCCGGCCCATCAAGCCAACCAGCCAAACAAAACACGGGTTAATGTCAGCGGGTTTTTCT TACCGTACGGCACAACCCCC
Downstream 100 bases:
>100_bases GCAAAGACCTCGCTTGTCTTATCGGGCCATTGCTTGCATCACTGCAATGGCCCCGGCATTCATTAGCTCTGATAAGAGCT CTCGAGCAAACTTCCGGCGG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPV AKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHAST EGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGK SLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIW NGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD A
Sequences:
>Translated_401_residues MAKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPV AKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHAST EGVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGK SLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIW NGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDD A >Mature_400_residues AKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVILSAHFGRPKGQINEGMRLTPVA KRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLENVRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTE GVTKFLNPSVAGHLMEKELQYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGKS LVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDIGPDSINLFQDALADCQTVIWN GPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=418, Percent_Identity=45.6937799043062, Blast_Score=345, Evalue=6e-95, Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=43.7956204379562, Blast_Score=337, Evalue=2e-92, Organism=Escherichia coli, GI1789294, Length=398, Percent_Identity=42.964824120603, Blast_Score=299, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17508823, Length=407, Percent_Identity=48.6486486486487, Blast_Score=366, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6319857, Length=405, Percent_Identity=49.3827160493827, Blast_Score=372, Evalue=1e-104, Organism=Drosophila melanogaster, GI17136394, Length=417, Percent_Identity=47.242206235012, Blast_Score=334, Evalue=7e-92, Organism=Drosophila melanogaster, GI24581203, Length=418, Percent_Identity=43.3014354066986, Blast_Score=316, Evalue=2e-86,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42104; Mature: 41972
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVIL CCCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEE SAHFGRPKGQINEGMRLTPVAKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLEN EECCCCCCCHHCCCCEECHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCEEEEEC VRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKEL CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH QYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGK HHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEHHHHCCCHHHH SLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDI HHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCCCEEEEE GPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDS CCCHHHHHHHHHHHHHHEEECCCCCCEEHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCC VAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCC >Mature Secondary Structure AKRSLSNLSAADLRSKRVLVRVDFNVPLNENGAITDDTRIRAALPTINDLIDKGARVIL CCCCCCCCCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCHHHHHHHCCCEEEE SAHFGRPKGQINEGMRLTPVAKRLSELLGKNVTKTESCVGSDAEAKVNAMADGDVVLLEN EECCCCCCCHHCCCCEECHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCEEEEEC VRFFSEEEKNDANFAQKLAALADAYVNDAFGAAHRAHASTEGVTKFLNPSVAGHLMEKEL CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHH QYLQGAIDDPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLSVGK HHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEHHHHCCCHHHH SLVEEDKLELAKELEAKAKAKGVQLLLPTDVVLADDFAPAANSQTVSIDAIPDGWMGLDI HHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCCCEEEEE GPDSINLFQDALADCQTVIWNGPMGVFEFDKFAAGTNAIATTLADLSGKGCCTIIGGGDS CCCHHHHHHHHHHHHHHEEECCCCCCEEHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCC VAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA