| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864301
Identifier: 33864301
GI number: 33864301
Start: 2149380
End: 2150639
Strand: Direct
Name: 33864301
Synonym: PMT2036
Alternate gene names: NA
Gene position: 2149380-2150639 (Clockwise)
Preceding gene: 33864300
Following gene: 33864304
Centisome position: 89.15
GC content: 43.73
Gene sequence:
>1260_bases ATGCTTTCCGCTACATTCCTCCGAGGCATACTGCGCAATATTAGTGAAAACAATAGCTACAACGATTCTTGGACTGTTGG GGAATGGCTTATAAACTACTCAGGAGGCTTTGTACGCCGAGGGCTGCCTGGATCCGGCATTTATCATCTAACAATTCTCA CAGGAGTTAATCCTGAAAATCTTGTTTTAGCTATATCTCTTTTATTCTTCGCAATTGTAGCGGTCTTTCTCTGCTGGCGT AGAGAGCTGTTGTTGCATCCACTGGTCATTCTTTCATCAGTAGGGCTTCTAGGGCCATTGACAACTGGCAATTTGATCCG AAAGGATTTTACTGTACTAATTCTTTTGCTTGCTTGTCTATTAATTCTTAGGGCCTGGTGGTCTCGTCGATGGTCGACAA TTCCAGCTCTAATCATGATCAATACAATCTCAATCATGGGCATCCTTAGCCAGGAAATATATGGTTTTGTTGCACTACCA ATATTAATTCTAATAGCAGGTTATTTGATCGCGCAAGATGGAAATTGCCATGTATTTATTTTTTGGAAAGGTTTAATAAG GGCCTTTCTATTCTTGCTCCCTACTTTGGCAATATTTTCCTTAGTTCTGCACGCACGTGGCAATAGTCAGATTGCCCATG CCATCCATAGTTCGTGGGTAGCACTTGCCGATCTAATGGGGCCGTCAGACAAGCTAATCAGTGGATCACCCGATGGAGCA ATTAAGGCCCTAGCCAGGGTCCCTGGCACTCAATTTGCCAAAACCTATACAATCTTCAAAAGCTTTGCGGGTCCGATTTG GGTGCCCCTGGCTTGGCTGATAACGGCCATGGCTGGATTACGTCTACTCTTGGCAGGATTTGGCCATAGTGCCATGGCCA ATATTAATTTTGATCGCTTTCAATTACGCCGCTTTGCTCTAATGGTGGCCTCGATCCAAATTATCGCCATTGCACCCCTA TTTATCCTCGGAACCGACTATGGTCGCTGGCTATCATTCTGGTATCTAAGCACTTTACTAATCGTATTGGTTTGGGCCCA AACGGATCTGATTAATGTTAATCAATATTCCTCCATTCATTTGCTTATGCCAACATCTATCGATTCGTACTTCATCAAAA TGCAGAATTGGCTTTGTTCTGATATGCATCCGAACACCCTTCGTTGGCTTGTAATCCTTCTAGGAATACCAGAACATGCT TCCTGGAGCCTAATGGATTGGCTTGCCGCCACTCCATTAGGCTATCTAATTTACCTCTAA
Upstream 100 bases:
>100_bases AGAGGCTTCTATTGATTTGAAAAAACATGGATGGCTACAGCTTTTTATGAGTCACTTCTGGGGTGTCTCATTATCTTCAG CAGACAGCATTGTGATGCTG
Downstream 100 bases:
>100_bases CAATTAATGATTTAATATTATCAACGCCTTGCGAATTCCTGGCGATCAGCAATCAAAACGCTTCTATGCAATTGAGAACA ATATGATTATTTCTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MLSATFLRGILRNISENNSYNDSWTVGEWLINYSGGFVRRGLPGSGIYHLTILTGVNPENLVLAISLLFFAIVAVFLCWR RELLLHPLVILSSVGLLGPLTTGNLIRKDFTVLILLLACLLILRAWWSRRWSTIPALIMINTISIMGILSQEIYGFVALP ILILIAGYLIAQDGNCHVFIFWKGLIRAFLFLLPTLAIFSLVLHARGNSQIAHAIHSSWVALADLMGPSDKLISGSPDGA IKALARVPGTQFAKTYTIFKSFAGPIWVPLAWLITAMAGLRLLLAGFGHSAMANINFDRFQLRRFALMVASIQIIAIAPL FILGTDYGRWLSFWYLSTLLIVLVWAQTDLINVNQYSSIHLLMPTSIDSYFIKMQNWLCSDMHPNTLRWLVILLGIPEHA SWSLMDWLAATPLGYLIYL
Sequences:
>Translated_419_residues MLSATFLRGILRNISENNSYNDSWTVGEWLINYSGGFVRRGLPGSGIYHLTILTGVNPENLVLAISLLFFAIVAVFLCWR RELLLHPLVILSSVGLLGPLTTGNLIRKDFTVLILLLACLLILRAWWSRRWSTIPALIMINTISIMGILSQEIYGFVALP ILILIAGYLIAQDGNCHVFIFWKGLIRAFLFLLPTLAIFSLVLHARGNSQIAHAIHSSWVALADLMGPSDKLISGSPDGA IKALARVPGTQFAKTYTIFKSFAGPIWVPLAWLITAMAGLRLLLAGFGHSAMANINFDRFQLRRFALMVASIQIIAIAPL FILGTDYGRWLSFWYLSTLLIVLVWAQTDLINVNQYSSIHLLMPTSIDSYFIKMQNWLCSDMHPNTLRWLVILLGIPEHA SWSLMDWLAATPLGYLIYL >Mature_419_residues MLSATFLRGILRNISENNSYNDSWTVGEWLINYSGGFVRRGLPGSGIYHLTILTGVNPENLVLAISLLFFAIVAVFLCWR RELLLHPLVILSSVGLLGPLTTGNLIRKDFTVLILLLACLLILRAWWSRRWSTIPALIMINTISIMGILSQEIYGFVALP ILILIAGYLIAQDGNCHVFIFWKGLIRAFLFLLPTLAIFSLVLHARGNSQIAHAIHSSWVALADLMGPSDKLISGSPDGA IKALARVPGTQFAKTYTIFKSFAGPIWVPLAWLITAMAGLRLLLAGFGHSAMANINFDRFQLRRFALMVASIQIIAIAPL FILGTDYGRWLSFWYLSTLLIVLVWAQTDLINVNQYSSIHLLMPTSIDSYFIKMQNWLCSDMHPNTLRWLVILLGIPEHA SWSLMDWLAATPLGYLIYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46842; Mature: 46842
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSATFLRGILRNISENNSYNDSWTVGEWLINYSGGFVRRGLPGSGIYHLTILTGVNPEN CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCCHH LVLAISLLFFAIVAVFLCWRRELLLHPLVILSSVGLLGPLTTGNLIRKDFTVLILLLACL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LILRAWWSRRWSTIPALIMINTISIMGILSQEIYGFVALPILILIAGYLIAQDGNCHVFI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEE FWKGLIRAFLFLLPTLAIFSLVLHARGNSQIAHAIHSSWVALADLMGPSDKLISGSPDGA EHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IKALARVPGTQFAKTYTIFKSFAGPIWVPLAWLITAMAGLRLLLAGFGHSAMANINFDRF HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHH QLRRFALMVASIQIIAIAPLFILGTDYGRWLSFWYLSTLLIVLVWAQTDLINVNQYSSIH HHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEE LLMPTSIDSYFIKMQNWLCSDMHPNTLRWLVILLGIPEHASWSLMDWLAATPLGYLIYL EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHEEEC >Mature Secondary Structure MLSATFLRGILRNISENNSYNDSWTVGEWLINYSGGFVRRGLPGSGIYHLTILTGVNPEN CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCCHH LVLAISLLFFAIVAVFLCWRRELLLHPLVILSSVGLLGPLTTGNLIRKDFTVLILLLACL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH LILRAWWSRRWSTIPALIMINTISIMGILSQEIYGFVALPILILIAGYLIAQDGNCHVFI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEE FWKGLIRAFLFLLPTLAIFSLVLHARGNSQIAHAIHSSWVALADLMGPSDKLISGSPDGA EHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH IKALARVPGTQFAKTYTIFKSFAGPIWVPLAWLITAMAGLRLLLAGFGHSAMANINFDRF HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHH QLRRFALMVASIQIIAIAPLFILGTDYGRWLSFWYLSTLLIVLVWAQTDLINVNQYSSIH HHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEE LLMPTSIDSYFIKMQNWLCSDMHPNTLRWLVILLGIPEHASWSLMDWLAATPLGYLIYL EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA