| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is plsC [H]
Identifier: 33864263
GI number: 33864263
Start: 2112524
End: 2113228
Strand: Direct
Name: plsC [H]
Synonym: PMT1998
Alternate gene names: 33864263
Gene position: 2112524-2113228 (Clockwise)
Preceding gene: 33864262
Following gene: 33864266
Centisome position: 87.62
GC content: 57.87
Gene sequence:
>705_bases TTGACCCAAACCAAACCCCGCCTGAGCTCAAGCATGCCGGTGCTAATGACACCGCAGCCAAGTCTCACCTATCGACTCGT GAGCTATCTACTGGTGTTTCCCATCTTCCGGGTTCTATTTAGGGGATGCACCTTTGGCAACGAAAATGTTCCGCGTCAAG GTGCTGTTGTGGTCGTCGCCAACCACGGCTCTCACCTTGACCCGCCCCTCCTTGGCCATGCTCTTGGGCGGCCTGTGGCC TTCATGGCCAAAGCAGAACTGTTCCGGATCCCCTTCTTAGGAGCAATCATCCGTGCCTGTGGTGCTTACCCGGTGAAACG CGGCGCCAGTGACAGGGAAGCCATTCGCATGGCCACTGCCCGCCTGAACGAAGGCTGGGCCATAGGGGTCTTCCTTGATG GCACTCGCCAAGCCAACGGCCGCGTCAATGCCCCCATGCCTGGGGCCGCACTGCTAGCGGCTCGCAGCGATGCGCCCCTA CTTCCAGTAGCGATCATCAATAGCCACCGTGCCCTTGGTAAACGTGGACAATTACCCCGACTCATACCAATACAACTTCG AATCGGCAAACCGATCCCCCCACCTTCCAGCCGTCGTAAACACGACTTGGAAGCCACCAGCGCAGAACTTCAAAAAAGAA TCAATGCGCTGCTGGATCAAGGACTTTTGAGTTCGGCAGAAGAGCGTCTCCGCCGCCAGCGCTGA
Upstream 100 bases:
>100_bases AATCGGCCCTGGCAATGTGCTGAGTGGTCTGGTCAAGCGATCTCTTCCAGGAGTTGCGACCATCCAGCTGAGCTGTGCTG CAGACCTGGGGAATTGAACT
Downstream 100 bases:
>100_bases GTGCCTCTGGCCAGCGCCGCTGCGCCCACTCCTTAAGATCACTGCCTGTAGCCACCCAAGCCCAAGCCCTTAACCAATCG CTGATCCGCTTGCGCAACCC
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTQTKPRLSSSMPVLMTPQPSLTYRLVSYLLVFPIFRVLFRGCTFGNENVPRQGAVVVVANHGSHLDPPLLGHALGRPVA FMAKAELFRIPFLGAIIRACGAYPVKRGASDREAIRMATARLNEGWAIGVFLDGTRQANGRVNAPMPGAALLAARSDAPL LPVAIINSHRALGKRGQLPRLIPIQLRIGKPIPPPSSRRKHDLEATSAELQKRINALLDQGLLSSAEERLRRQR
Sequences:
>Translated_234_residues MTQTKPRLSSSMPVLMTPQPSLTYRLVSYLLVFPIFRVLFRGCTFGNENVPRQGAVVVVANHGSHLDPPLLGHALGRPVA FMAKAELFRIPFLGAIIRACGAYPVKRGASDREAIRMATARLNEGWAIGVFLDGTRQANGRVNAPMPGAALLAARSDAPL LPVAIINSHRALGKRGQLPRLIPIQLRIGKPIPPPSSRRKHDLEATSAELQKRINALLDQGLLSSAEERLRRQR >Mature_233_residues TQTKPRLSSSMPVLMTPQPSLTYRLVSYLLVFPIFRVLFRGCTFGNENVPRQGAVVVVANHGSHLDPPLLGHALGRPVAF MAKAELFRIPFLGAIIRACGAYPVKRGASDREAIRMATARLNEGWAIGVFLDGTRQANGRVNAPMPGAALLAARSDAPLL PVAIINSHRALGKRGQLPRLIPIQLRIGKPIPPPSSRRKHDLEATSAELQKRINALLDQGLLSSAEERLRRQR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 25565; Mature: 25434
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTKPRLSSSMPVLMTPQPSLTYRLVSYLLVFPIFRVLFRGCTFGNENVPRQGAVVVVA CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE NHGSHLDPPLLGHALGRPVAFMAKAELFRIPFLGAIIRACGAYPVKRGASDREAIRMATA CCCCCCCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RLNEGWAIGVFLDGTRQANGRVNAPMPGAALLAARSDAPLLPVAIINSHRALGKRGQLPR HCCCCEEEEEEEECCCCCCCEECCCCCCCEEEEECCCCCEEEHEECCCCHHHCCCCCCCC LIPIQLRIGKPIPPPSSRRKHDLEATSAELQKRINALLDQGLLSSAEERLRRQR EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQTKPRLSSSMPVLMTPQPSLTYRLVSYLLVFPIFRVLFRGCTFGNENVPRQGAVVVVA CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE NHGSHLDPPLLGHALGRPVAFMAKAELFRIPFLGAIIRACGAYPVKRGASDREAIRMATA CCCCCCCCHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RLNEGWAIGVFLDGTRQANGRVNAPMPGAALLAARSDAPLLPVAIINSHRALGKRGQLPR HCCCCEEEEEEEECCCCCCCEECCCCCCCEEEEECCCCCEEEHEECCCCHHHCCCCCCCC LIPIQLRIGKPIPPPSSRRKHDLEATSAELQKRINALLDQGLLSSAEERLRRQR EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]