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The map label for this gene is yfhF [C]

Identifier: 33864234

GI number: 33864234

Start: 2080312

End: 2080704

Strand: Direct

Name: yfhF [C]

Synonym: PMT1969

Alternate gene names: 33864234

Gene position: 2080312-2080704 (Clockwise)

Preceding gene: 33864231

Following gene: 33864235

Centisome position: 86.29

GC content: 54.96

Gene sequence:

>393_bases
ATGACCAGCACCACTCATCCTGCAACCCACCACACAGCGACTGACGGCAAAGGCATCCAAATCACCAACACAGCTATGCA
GCAGTTGGCCAGGCTCTGCCTTGAGAAGGGGAATGATCAGGTACTGCGAGTAGGCGTGCGCTCGGGCGGCTGCAGCGGCA
TGAGCTACACCATGGATTTTGTCCCCTCAGCCGATATCCAAGAGGGTGATGAGGTCTATGAGTACACCGCAACCGATGGC
GCAAGTTTCCGTGTGATCTGTGATCCCAAGAGCCTGCTGTACATCTATGGGATGCAATTGGATTTCAGCACTGAAATGAT
TGGCGGCGGCTTCAATTTCACCAATCCCAACGCCAGCCAAACCTGCGGTTGCGGCAGCTCATTCGCTGTCTGA

Upstream 100 bases:

>100_bases
CCTTCCGACTCTATAAATATGGCGGATAGGTTGACTGCATTGGATAGTGCAACGAGAGACATCCCTCCATAAAATGAATT
GAGGTCTGTGCCAGCACTGA

Downstream 100 bases:

>100_bases
AGTCAATGGCCACCGCTCCGTGGGAATCTGAAGAGACCTAAGCAGTTCTGCTGCATCAGATGGCGTCCACCAACGAGAAC
CTCTTCGAAACAGCCATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTSTTHPATHHTATDGKGIQITNTAMQQLARLCLEKGNDQVLRVGVRSGGCSGMSYTMDFVPSADIQEGDEVYEYTATDG
ASFRVICDPKSLLYIYGMQLDFSTEMIGGGFNFTNPNASQTCGCGSSFAV

Sequences:

>Translated_130_residues
MTSTTHPATHHTATDGKGIQITNTAMQQLARLCLEKGNDQVLRVGVRSGGCSGMSYTMDFVPSADIQEGDEVYEYTATDG
ASFRVICDPKSLLYIYGMQLDFSTEMIGGGFNFTNPNASQTCGCGSSFAV
>Mature_129_residues
TSTTHPATHHTATDGKGIQITNTAMQQLARLCLEKGNDQVLRVGVRSGGCSGMSYTMDFVPSADIQEGDEVYEYTATDGA
SFRVICDPKSLLYIYGMQLDFSTEMIGGGFNFTNPNASQTCGCGSSFAV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI160420328, Length=139, Percent_Identity=35.2517985611511, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI52426768, Length=113, Percent_Identity=32.7433628318584, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788877, Length=112, Percent_Identity=39.2857142857143, Blast_Score=82, Evalue=8e-18,
Organism=Escherichia coli, GI1786351, Length=113, Percent_Identity=35.3982300884956, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1787974, Length=114, Percent_Identity=32.4561403508772, Blast_Score=62, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146411, Length=113, Percent_Identity=34.5132743362832, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=113, Percent_Identity=34.5132743362832, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323001, Length=112, Percent_Identity=33.9285714285714, Blast_Score=71, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325324, Length=139, Percent_Identity=28.7769784172662, Blast_Score=61, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24642263, Length=113, Percent_Identity=34.5132743362832, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24649697, Length=126, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13897; Mature: 13765

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTTHPATHHTATDGKGIQITNTAMQQLARLCLEKGNDQVLRVGVRSGGCSGMSYTMDF
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEC
VPSADIQEGDEVYEYTATDGASFRVICDPKSLLYIYGMQLDFSTEMIGGGFNFTNPNASQ
CCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCHHEECCCCCCCCCCCCC
TCGCGSSFAV
CCCCCCCCCC
>Mature Secondary Structure 
TSTTHPATHHTATDGKGIQITNTAMQQLARLCLEKGNDQVLRVGVRSGGCSGMSYTMDF
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEC
VPSADIQEGDEVYEYTATDGASFRVICDPKSLLYIYGMQLDFSTEMIGGGFNFTNPNASQ
CCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCHHEECCCCCCCCCCCCC
TCGCGSSFAV
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]