| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864205
Identifier: 33864205
GI number: 33864205
Start: 2050668
End: 2051900
Strand: Direct
Name: 33864205
Synonym: PMT1940
Alternate gene names: NA
Gene position: 2050668-2051900 (Clockwise)
Preceding gene: 33864204
Following gene: 33864206
Centisome position: 85.06
GC content: 41.12
Gene sequence:
>1233_bases ATGACTTCCTGCAAAACTAAGCTTCAGTCTCTCAGTTCAGCTTTCTATCAAAGCAGTCTTACAAAGAGCGCTTTTACCAT CGGAGTTGCTGGCACAATTTTGGGGTTGTCTACGGCTCCAGCATTCGCAGACGCAATGGGGTTGGGCTGGTGCGTCCACA ACTGCGGCTTTGGGCTTGAGGATAAGATTACAGCAGCCCATGTGCATTTGAGACTGCACGTTAAGTTACAAAAGCAAAGC CTTATTCAATGCATGGATAAAGCTTATCTTATTGAGCATAAAAGACATGGACCAGCTAAAATCGTAAGCTTTTTATCAAA GCGGTTCGAGCTCCCTATTGCGATTTTCTACGTTGGAATGGGAAATGTTTTTGACAAGAATTCTGAAGGCAAACCCGTTA TGAAGGCAGCCACCAAATGGCTAGGCAAAAAAGGAGGTTACATTAAATTCGATCATAGCTTTGTTGATACTAATACAACC AAGAGAGTTGCTAGCAAAATTGCCCATGCGCTAATGCACTATAGTGGATTTAAACATATTAAAGATATTCATCACCCACT GCATCCAAATACTGTTCCTGCACAAATTGAGGCATGCATCCTGAAAGGTAGTCCCAATAACTACAATGGTTTTGGAAATG ATAAATATAACTCAAAGGATGTCGTAGGGATTGGGATTGATGGAGACAACAATCATTTCTTTGCATGGTATAAAGATGGA ACTGTTACTGCAGGTTCAAGCACGCGTATTCATAACTATCGTTCTCCATACAAGTACTCCATTAGGAATGGCTACTCCAG CTCCAATATTGTAGGCATGGCAATTGATGGTGACATCAATAGCAGTTACGCCTGGTTCGACAATGGAATCGTTACTTCTG GAAGCACAAATGATCTTAGCAAGCATCGCGCTCCATATAAATATTCATTGCCCAAAGGTTATTCGCCTAAGGATATTGTA GCAATGGCACTCGATGATGACGATAACCACGTATATGCCTTTTACAAGAATGGCATGGTTTCGTCTGGAACGACTAACGA TCTAGACAAGTTTAGGAAGCCATACGAATACAAATTACCACCAGGCTATTCGCCAAGTGATATTGTTGGAATTGCAATCG ATGGTAACAACAACAAGGTTTTCTCCTTCTATCGAAATAATAAAGTATCGCAAGGAACCACGGCTAATCTTTATAGGGAT GAAGCTCTTAGAGAAGTAATTACTGGCAGATAA
Upstream 100 bases:
>100_bases GATCACAGCAATATGTAAGGCAGAACATATACCCTTCAAAGTTTCAACCGATATTGTTTCCATGGAGGAAAAGACTTTTA TCAATTAAAAACTATAAAGA
Downstream 100 bases:
>100_bases ATTATGTGATCCTTAAAACATTCATGCCCCGTCTCGCACGGGGTATTTTTTTATTAGCAGCAAGATCAGCAATCTTGAGC AGTGGTGTTCCGTTTTCCAG
Product: C9 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTSCKTKLQSLSSAFYQSSLTKSAFTIGVAGTILGLSTAPAFADAMGLGWCVHNCGFGLEDKITAAHVHLRLHVKLQKQS LIQCMDKAYLIEHKRHGPAKIVSFLSKRFELPIAIFYVGMGNVFDKNSEGKPVMKAATKWLGKKGGYIKFDHSFVDTNTT KRVASKIAHALMHYSGFKHIKDIHHPLHPNTVPAQIEACILKGSPNNYNGFGNDKYNSKDVVGIGIDGDNNHFFAWYKDG TVTAGSSTRIHNYRSPYKYSIRNGYSSSNIVGMAIDGDINSSYAWFDNGIVTSGSTNDLSKHRAPYKYSLPKGYSPKDIV AMALDDDDNHVYAFYKNGMVSSGTTNDLDKFRKPYEYKLPPGYSPSDIVGIAIDGNNNKVFSFYRNNKVSQGTTANLYRD EALREVITGR
Sequences:
>Translated_410_residues MTSCKTKLQSLSSAFYQSSLTKSAFTIGVAGTILGLSTAPAFADAMGLGWCVHNCGFGLEDKITAAHVHLRLHVKLQKQS LIQCMDKAYLIEHKRHGPAKIVSFLSKRFELPIAIFYVGMGNVFDKNSEGKPVMKAATKWLGKKGGYIKFDHSFVDTNTT KRVASKIAHALMHYSGFKHIKDIHHPLHPNTVPAQIEACILKGSPNNYNGFGNDKYNSKDVVGIGIDGDNNHFFAWYKDG TVTAGSSTRIHNYRSPYKYSIRNGYSSSNIVGMAIDGDINSSYAWFDNGIVTSGSTNDLSKHRAPYKYSLPKGYSPKDIV AMALDDDDNHVYAFYKNGMVSSGTTNDLDKFRKPYEYKLPPGYSPSDIVGIAIDGNNNKVFSFYRNNKVSQGTTANLYRD EALREVITGR >Mature_409_residues TSCKTKLQSLSSAFYQSSLTKSAFTIGVAGTILGLSTAPAFADAMGLGWCVHNCGFGLEDKITAAHVHLRLHVKLQKQSL IQCMDKAYLIEHKRHGPAKIVSFLSKRFELPIAIFYVGMGNVFDKNSEGKPVMKAATKWLGKKGGYIKFDHSFVDTNTTK RVASKIAHALMHYSGFKHIKDIHHPLHPNTVPAQIEACILKGSPNNYNGFGNDKYNSKDVVGIGIDGDNNHFFAWYKDGT VTAGSSTRIHNYRSPYKYSIRNGYSSSNIVGMAIDGDINSSYAWFDNGIVTSGSTNDLSKHRAPYKYSLPKGYSPKDIVA MALDDDDNHVYAFYKNGMVSSGTTNDLDKFRKPYEYKLPPGYSPSDIVGIAIDGNNNKVFSFYRNNKVSQGTTANLYRDE ALREVITGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45339; Mature: 45208
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCKTKLQSLSSAFYQSSLTKSAFTIGVAGTILGLSTAPAFADAMGLGWCVHNCGFGLE CCHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DKITAAHVHLRLHVKLQKQSLIQCMDKAYLIEHKRHGPAKIVSFLSKRFELPIAIFYVGM CCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECC GNVFDKNSEGKPVMKAATKWLGKKGGYIKFDHSFVDTNTTKRVASKIAHALMHYSGFKHI CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHCHHHH KDIHHPLHPNTVPAQIEACILKGSPNNYNGFGNDKYNSKDVVGIGIDGDNNHFFAWYKDG HHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC TVTAGSSTRIHNYRSPYKYSIRNGYSSSNIVGMAIDGDINSSYAWFDNGIVTSGSTNDLS EEECCCCCEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCCHH KHRAPYKYSLPKGYSPKDIVAMALDDDDNHVYAFYKNGMVSSGTTNDLDKFRKPYEYKLP HCCCCCEECCCCCCCCCCEEEEEEECCCCEEEEEEECCEECCCCCCCHHHHCCCCEEECC PGYSPSDIVGIAIDGNNNKVFSFYRNNKVSQGTTANLYRDEALREVITGR CCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TSCKTKLQSLSSAFYQSSLTKSAFTIGVAGTILGLSTAPAFADAMGLGWCVHNCGFGLE CHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC DKITAAHVHLRLHVKLQKQSLIQCMDKAYLIEHKRHGPAKIVSFLSKRFELPIAIFYVGM CCEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECC GNVFDKNSEGKPVMKAATKWLGKKGGYIKFDHSFVDTNTTKRVASKIAHALMHYSGFKHI CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHCHHHH KDIHHPLHPNTVPAQIEACILKGSPNNYNGFGNDKYNSKDVVGIGIDGDNNHFFAWYKDG HHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC TVTAGSSTRIHNYRSPYKYSIRNGYSSSNIVGMAIDGDINSSYAWFDNGIVTSGSTNDLS EEECCCCCEECCCCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCEEECCCCCCHH KHRAPYKYSLPKGYSPKDIVAMALDDDDNHVYAFYKNGMVSSGTTNDLDKFRKPYEYKLP HCCCCCEECCCCCCCCCCEEEEEEECCCCEEEEEEECCEECCCCCCCHHHHCCCCEEECC PGYSPSDIVGIAIDGNNNKVFSFYRNNKVSQGTTANLYRDEALREVITGR CCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA