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The map label for this gene is glcF [H]

Identifier: 33864202

GI number: 33864202

Start: 2046097

End: 2047542

Strand: Direct

Name: glcF [H]

Synonym: PMT1937

Alternate gene names: 33864202

Gene position: 2046097-2047542 (Clockwise)

Preceding gene: 33864201

Following gene: 33864204

Centisome position: 84.87

GC content: 56.29

Gene sequence:

>1446_bases
ATGACTTCTGTTGACGTCACGCCAAACCAAACTGACAAGGCCCTGAGCAGCCTCCCAGCAGACGCCACCGACCCCTGCGT
GCACTGCGGTTTCTGCCTGCCAACCTGCGCAAGTTACCGAGTGTTAGGCACTGAAATGGATTCACCGCGAGGGCGAATCC
ACACCCTCAAGGCTATCGACAACGGTGAGCTGGAGCTTGATGCCACCGTCGCTAGCCACTTCGACTCCTGCCTAGGTTGC
TTTGCCTGTGTGAGTGCCTGCCCCTCAGGAGTTCGCTACGACCAGCTCATCGAGGCGACGCGCCCTTTACTGAACCAAGC
AGAACTTCGCAGCCCCTGCCAGAACCACTTTCGTCAAGTTCTACTGAAGTTGCTCCCCTATCCCGGCCGACTGCGCGCCC
TTCTGCAACCTTTGCGTGCCTACGCGGGGACACCAATACAAGCGCTCAGCCGCCGCCTAGGCATCAACAAAATTCTTGGG
CCCCAACTGGAAGCGATGGAGGCCTTGTTGCCTACTCTTGCAGCAGAAAATTTTCAGGATGATCTGCAGGTTCTCCACCC
CGCAACAGGTCAACGCCGCAGCAGAGTGGGGCTTGTTCTTGGCTGTGTGCAACGTTGCTTCGATCCCAACGTGAACCAAG
CCACTATTGCCGTGCTGCAAGCCAATGGCTTTGAAGTCGTTGTGCCAAAAGATCAAGGCTGCTGCGGCGCCGTCTCCCAC
CACCAGGGGCAACTCAACCAAACCCGAGAGCTAGCCGAGAAGCTTGTCAAAAGCTTTGCCAATGTTGTCGGCCCAGGGCG
ACCTGCTGGAGCCGAGCCCTTAGAGGCTGTGCTGGTGGCCGCCTCGGGCTGTGGCCACACCATGAAGGCCTACGGCGAAC
TCCTCAATGAGAAAAAAGGGTTCAACATTCCCGTCTTCGATGTGCATGAATTCCTTGCGGAACACGGCCTCGCCAGCAAC
TTTCAGCAAAGCCTTCAGCCTCTTACCCATCACAATGGACAGCCTGCAAGCCCCCAAACTCCTCTGAAAGTTGCATACCA
CGATGCCTGCCACATGATTCATGGCCAAGGAATCCAAGCCCAACCAAGAAAACTATTGAAGGCCATTCCACATCTAGTTT
TGAGCGAAGCCACAGAAGCCGGAGTTTGCTGTGGAAGCGCCGGAATTTATAACTTGGTCAACCCTCAAGAAGCTGCCGAG
CTGGGGAGAATCAAGGTTGCTGACCTCAGCAACACTGGAGCTGAGCTGATTGCCAGCGCCAACATTGGCTGCACCTTGCA
ACTCCGCCGCCATCTGGATGGTGATGTGGCAGTCGCCCATCCAATGGAACTACTGGCCTGTGCTGCCGGCCTCCATCAAT
CGCCAGGCATCCAAAAGGGTTTGAGAATCACCAAGATTTCCGGGGAAGGTCAGGATCGGCAGATCAACCAAGCCATCTCC
AGCTAA

Upstream 100 bases:

>100_bases
CTTCAGGCAACAGCCAACGGTATTGAGAACGATCGCCAATAGTGATGGCACATCCTGCCAGCATGCGACAGAGCGGCATG
GAAGTCGCCAGACTCAAAGC

Downstream 100 bases:

>100_bases
AGGCCGCACCAACGACAAGCCTGGCAAGATTTGCCCCTCCAGCTGCACCATCTCCAAGCCCAGCCCTTCTGCCAACAGAG
TATGGGTTGTAATTCCACCC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MTSVDVTPNQTDKALSSLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIDNGELELDATVASHFDSCLGC
FACVSACPSGVRYDQLIEATRPLLNQAELRSPCQNHFRQVLLKLLPYPGRLRALLQPLRAYAGTPIQALSRRLGINKILG
PQLEAMEALLPTLAAENFQDDLQVLHPATGQRRSRVGLVLGCVQRCFDPNVNQATIAVLQANGFEVVVPKDQGCCGAVSH
HQGQLNQTRELAEKLVKSFANVVGPGRPAGAEPLEAVLVAASGCGHTMKAYGELLNEKKGFNIPVFDVHEFLAEHGLASN
FQQSLQPLTHHNGQPASPQTPLKVAYHDACHMIHGQGIQAQPRKLLKAIPHLVLSEATEAGVCCGSAGIYNLVNPQEAAE
LGRIKVADLSNTGAELIASANIGCTLQLRRHLDGDVAVAHPMELLACAAGLHQSPGIQKGLRITKISGEGQDRQINQAIS
S

Sequences:

>Translated_481_residues
MTSVDVTPNQTDKALSSLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIDNGELELDATVASHFDSCLGC
FACVSACPSGVRYDQLIEATRPLLNQAELRSPCQNHFRQVLLKLLPYPGRLRALLQPLRAYAGTPIQALSRRLGINKILG
PQLEAMEALLPTLAAENFQDDLQVLHPATGQRRSRVGLVLGCVQRCFDPNVNQATIAVLQANGFEVVVPKDQGCCGAVSH
HQGQLNQTRELAEKLVKSFANVVGPGRPAGAEPLEAVLVAASGCGHTMKAYGELLNEKKGFNIPVFDVHEFLAEHGLASN
FQQSLQPLTHHNGQPASPQTPLKVAYHDACHMIHGQGIQAQPRKLLKAIPHLVLSEATEAGVCCGSAGIYNLVNPQEAAE
LGRIKVADLSNTGAELIASANIGCTLQLRRHLDGDVAVAHPMELLACAAGLHQSPGIQKGLRITKISGEGQDRQINQAIS
S
>Mature_480_residues
TSVDVTPNQTDKALSSLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAIDNGELELDATVASHFDSCLGCF
ACVSACPSGVRYDQLIEATRPLLNQAELRSPCQNHFRQVLLKLLPYPGRLRALLQPLRAYAGTPIQALSRRLGINKILGP
QLEAMEALLPTLAAENFQDDLQVLHPATGQRRSRVGLVLGCVQRCFDPNVNQATIAVLQANGFEVVVPKDQGCCGAVSHH
QGQLNQTRELAEKLVKSFANVVGPGRPAGAEPLEAVLVAASGCGHTMKAYGELLNEKKGFNIPVFDVHEFLAEHGLASNF
QQSLQPLTHHNGQPASPQTPLKVAYHDACHMIHGQGIQAQPRKLLKAIPHLVLSEATEAGVCCGSAGIYNLVNPQEAAEL
GRIKVADLSNTGAELIASANIGCTLQLRRHLDGDVAVAHPMELLACAAGLHQSPGIQKGLRITKISGEGQDRQINQAISS

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=421, Percent_Identity=32.7790973871734, Blast_Score=185, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 51408; Mature: 51276

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVDVTPNQTDKALSSLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAID
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCEEECCCCCCCCCCEEEEEEEC
NGELELDATVASHFDSCLGCFACVSACPSGVRYDQLIEATRPLLNQAELRSPCQNHFRQV
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKLLPYPGRLRALLQPLRAYAGTPIQALSRRLGINKILGPQLEAMEALLPTLAAENFQD
HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCHHH
DLQVLHPATGQRRSRVGLVLGCVQRCFDPNVNQATIAVLQANGFEVVVPKDQGCCGAVSH
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHH
HQGQLNQTRELAEKLVKSFANVVGPGRPAGAEPLEAVLVAASGCGHTMKAYGELLNEKKG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FNIPVFDVHEFLAEHGLASNFQQSLQPLTHHNGQPASPQTPLKVAYHDACHMIHGQGIQA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QPRKLLKAIPHLVLSEATEAGVCCGSAGIYNLVNPQEAAELGRIKVADLSNTGAELIASA
CHHHHHHHHHHHHHHHCHHHCCEECCCCCCCCCCHHHHHHHCCEEEECCCCCCHHHHCCC
NIGCTLQLRRHLDGDVAVAHPMELLACAAGLHQSPGIQKGLRITKISGEGQDRQINQAIS
CCCEEEEEHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCHHHHHHHC
S
C
>Mature Secondary Structure 
TSVDVTPNQTDKALSSLPADATDPCVHCGFCLPTCASYRVLGTEMDSPRGRIHTLKAID
CCCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCEEECCCCCCCCCCEEEEEEEC
NGELELDATVASHFDSCLGCFACVSACPSGVRYDQLIEATRPLLNQAELRSPCQNHFRQV
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKLLPYPGRLRALLQPLRAYAGTPIQALSRRLGINKILGPQLEAMEALLPTLAAENFQD
HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCHHH
DLQVLHPATGQRRSRVGLVLGCVQRCFDPNVNQATIAVLQANGFEVVVPKDQGCCGAVSH
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHH
HQGQLNQTRELAEKLVKSFANVVGPGRPAGAEPLEAVLVAASGCGHTMKAYGELLNEKKG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FNIPVFDVHEFLAEHGLASNFQQSLQPLTHHNGQPASPQTPLKVAYHDACHMIHGQGIQA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QPRKLLKAIPHLVLSEATEAGVCCGSAGIYNLVNPQEAAELGRIKVADLSNTGAELIASA
CHHHHHHHHHHHHHHHCHHHCCEECCCCCCCCCCHHHHHHHCCEEEECCCCCCHHHHCCC
NIGCTLQLRRHLDGDVAVAHPMELLACAAGLHQSPGIQKGLRITKISGEGQDRQINQAIS
CCCEEEEEHHCCCCCEEHHHHHHHHHHHHCCCCCCCHHHCCEEEEECCCCCCHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]