| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864189
Identifier: 33864189
GI number: 33864189
Start: 2032264
End: 2032623
Strand: Reverse
Name: 33864189
Synonym: PMT1923
Alternate gene names: NA
Gene position: 2032623-2032264 (Counterclockwise)
Preceding gene: 33864190
Following gene: 33864188
Centisome position: 84.31
GC content: 55.0
Gene sequence:
>360_bases ATGACCGCTATGGCGCAATGCGTGTGCAGCATGAACATTTCGGGGGAGACCGTGAAGTTCCTCGGGGAGGTGCAGAGCGC TTATCTGAAGAAGAACTGGAGTTCGTTGATGCTGCTGAACTGTGGTCGTTGCAACAAACTCACTGTGGATTACGTGAATA CGTCCACAGGCTTAGAGCCGCATCGCTTTCATTGGCTGGAGGGCGACCATAAGATCGGAGTCATCGAGGGCGGTTGGAAT CACCTTGTGGATGTGCAGGTTCCGCTGGCTCCCATGCTGCTGTTGTTCTGGTCCCTTGCTGGCCTGGGCCAGCAGTGCAA AATGGGACCCTTGCCGAGATCTGTTCGACAAGCGTCTTAG
Upstream 100 bases:
>100_bases TTTCTCGTTCCCCGCTTTATGGGCTATCACGGCTGGGCGCTTTTTATGGATTGCGGCATGTTGTGCCGCGCCGATATCAA GGCACTTTGGGATCAGCGGG
Downstream 100 bases:
>100_bases CCAGTGTGCCGATGCCTGCGAATGACATCACGACCTGGAGGGAACAGTGGCTTATGCCACTGAAGCGACTCAATCGATTC AGACTTTGGCTTTGGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTAMAQCVCSMNISGETVKFLGEVQSAYLKKNWSSLMLLNCGRCNKLTVDYVNTSTGLEPHRFHWLEGDHKIGVIEGGWN HLVDVQVPLAPMLLLFWSLAGLGQQCKMGPLPRSVRQAS
Sequences:
>Translated_119_residues MTAMAQCVCSMNISGETVKFLGEVQSAYLKKNWSSLMLLNCGRCNKLTVDYVNTSTGLEPHRFHWLEGDHKIGVIEGGWN HLVDVQVPLAPMLLLFWSLAGLGQQCKMGPLPRSVRQAS >Mature_118_residues TAMAQCVCSMNISGETVKFLGEVQSAYLKKNWSSLMLLNCGRCNKLTVDYVNTSTGLEPHRFHWLEGDHKIGVIEGGWNH LVDVQVPLAPMLLLFWSLAGLGQQCKMGPLPRSVRQAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13191; Mature: 13059
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMAQCVCSMNISGETVKFLGEVQSAYLKKNWSSLMLLNCGRCNKLTVDYVNTSTGLEP CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCC HRFHWLEGDHKIGVIEGGWNHLVDVQVPLAPMLLLFWSLAGLGQQCKMGPLPRSVRQAS CEEEEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TAMAQCVCSMNISGETVKFLGEVQSAYLKKNWSSLMLLNCGRCNKLTVDYVNTSTGLEP CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCC HRFHWLEGDHKIGVIEGGWNHLVDVQVPLAPMLLLFWSLAGLGQQCKMGPLPRSVRQAS CEEEEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA