| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864148
Identifier: 33864148
GI number: 33864148
Start: 1987290
End: 1987847
Strand: Reverse
Name: 33864148
Synonym: PMT1882
Alternate gene names: NA
Gene position: 1987847-1987290 (Counterclockwise)
Preceding gene: 33864151
Following gene: 33864147
Centisome position: 82.45
GC content: 55.73
Gene sequence:
>558_bases TTGCATGGCTGCATCAATGCCGTGAAGCAAGTCAATGCAAAAGGTAAGACCTTCCTGTTAGTGGCTTTGGCCGTAGTGCT TAACGGCTGTATGACGTCGTCTTCCAAGCCCAGCTGGGCTATTTATCCCTTGCAGCGGCATCAAGCTCATGACGGCCTGG CGGTGGTGAGTGAGCCTGATGGCTATGGCGTGCATCTCTTTCTCGAAACGGACACCAGTGATCCAGGGATCTGTACGCCC CGTTGGTTGCCAGACCCTGCAAGGCTTTTCAATGGCAATGGCAATGCCCCATTCAGCTCAGGGCTTGCGTCTCGTAAGGA ATTTTTCGTGGTAGTGGCCCGCGGGGATGTCCGCCGTGCCTTGAAGCGTGAGCTGAAGGCTCTTTGTGTTGATCGGGCAC CTAGGGCGAGATGGCGTTGGCAGGAGCCGCCCCGCGCTGCTGATCAGGTGAAGCCTTTGAGATTGCCTGCGTTGGAGGAA GAAGACCTGCTCAGGGATCCAGAAGAAGAGAGGAAGCTTCAGGAGGAGTTGTTAAACGGCAACTGGTCTGGAAGCTGA
Upstream 100 bases:
>100_bases TCAATTCAAACGCCGGTAAGGGGGTCCCGAGAGGCAGCATCGTGGAGGGAGTGAGGGCCATGTTGGGAAAGCAGCCCTTC AATGCTGGTTCAGGATGACT
Downstream 100 bases:
>100_bases TCGAATAGAACTCTTGGCGACCTTATTCGGGGCATCCAGTGAAACTCGGCGTGGCATGGGAGAGAATCGCTGCCAATGTT CCCTAGTGCGTTCGCTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MHGCINAVKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPGICTP RWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEE EDLLRDPEEERKLQEELLNGNWSGS
Sequences:
>Translated_185_residues MHGCINAVKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPGICTP RWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEE EDLLRDPEEERKLQEELLNGNWSGS >Mature_185_residues MHGCINAVKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPDGYGVHLFLETDTSDPGICTP RWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRALKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEE EDLLRDPEEERKLQEELLNGNWSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20607; Mature: 20607
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGCINAVKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPD CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEECCC GYGVHLFLETDTSDPGICTPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRA CCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCEEEEEEECCHHHHH LKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEEEDLLRDPEEERKLQEELLNG HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCC NWSGS CCCCC >Mature Secondary Structure MHGCINAVKQVNAKGKTFLLVALAVVLNGCMTSSSKPSWAIYPLQRHQAHDGLAVVSEPD CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCEEEEECCC GYGVHLFLETDTSDPGICTPRWLPDPARLFNGNGNAPFSSGLASRKEFFVVVARGDVRRA CCEEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCEEEEEEECCHHHHH LKRELKALCVDRAPRARWRWQEPPRAADQVKPLRLPALEEEDLLRDPEEERKLQEELLNG HHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCC NWSGS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA