| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is psbK
Identifier: 33864130
GI number: 33864130
Start: 1970656
End: 1970799
Strand: Direct
Name: psbK
Synonym: PMT1863
Alternate gene names: 33864130
Gene position: 1970656-1970799 (Clockwise)
Preceding gene: 33864129
Following gene: 33864135
Centisome position: 81.74
GC content: 53.47
Gene sequence:
>144_bases ATGGCAGCCTTCACTCTCGATCTGATGGCCCAACTGCCAGAGGCCTATCAGGCCTACGCTCCAGCAGTGGATGTTCTTCC ACTCATCCCCATTTTCTTCTTCCTGCTTGTCTTTGTTTGGCAAGCATCTGTGGGCTTCCGCTGA
Upstream 100 bases:
>100_bases TCAAGATGACTGTTTTTCAGAGGATTTCGCTCCTTGGCAACCGGACTCAGCAGCACATCACACGTGGTAACGTCCATGAA ACGCAGCTGAGCAACTAGGG
Downstream 100 bases:
>100_bases AGCATTCATTTCAATCAACGCTTTTTTCCTCGACGCCATACCTCCCAGACGAAGGTAGGCAGACAAAGAATGCGATTCCA TCGGCTGGGCTCTTGGCCCA
Product: photosystem II reaction center protein K
Products: NA
Alternate protein names: PSII-K
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MAAFTLDLMAQLPEAYQAYAPAVDVLPLIPIFFFLLVFVWQASVGFR
Sequences:
>Translated_47_residues MAAFTLDLMAQLPEAYQAYAPAVDVLPLIPIFFFLLVFVWQASVGFR >Mature_46_residues AAFTLDLMAQLPEAYQAYAPAVDVLPLIPIFFFLLVFVWQASVGFR
Specific function: This protein is a component of the reaction center of photosystem II
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psbK family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSBK_PROM3 (A2CCL2)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001018487.1 - ProteinModelPortal: A2CCL2 - SMR: A2CCL2 - STRING: A2CCL2 - GeneID: 4776978 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_24911 - HOGENOM: HBG711122 - ProtClustDB: PRK02553 - GO: GO:0015979 - HAMAP: MF_00441 - InterPro: IPR003687 - ProDom: PD004458
Pfam domain/function: PF02533 PsbK
EC number: NA
Molecular weight: Translated: 5292; Mature: 5161
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFTLDLMAQLPEAYQAYAPAVDVLPLIPIFFFLLVFVWQASVGFR CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAFTLDLMAQLPEAYQAYAPAVDVLPLIPIFFFLLVFVWQASVGFR CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA