| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864057
Identifier: 33864057
GI number: 33864057
Start: 1889116
End: 1891782
Strand: Reverse
Name: 33864057
Synonym: PMT1790
Alternate gene names: NA
Gene position: 1891782-1889116 (Counterclockwise)
Preceding gene: 33864061
Following gene: 33864056
Centisome position: 78.47
GC content: 56.09
Gene sequence:
>2667_bases TTGGCCATGACCGTCGCCTCACCCCGTCTGGAGCCGGTGGATTTCGACAGCCTGGTCAATGCCGGGATCAATCGCCCTGC CCGTTACATGGGCCATGAGTTGGGGGTGGAGCCTCGTGATTGGCAGGCCTCTCGGGTGCGCTGGGCTCTCTCCTACCCGG AGATCTACGAGGTGGGCGCGAGCAATCAGGGCCACATCATTCTTTATTCGATTCTCAACGCAGTTCCAGGTCAGCTTTGT GACAGGGCCTATCTTCCCGCTCAGGACCTGGCCCAGCGCTTGCGGGATCTTCGGCAGCCTCTGTTCGCGGTGGAGAGTCG CCGTCCTCTCCAGGCCTTCGACATCCTTGGCTTCAGTCTCTGTTATGAGCTTGGAGCCACAAACATCCTTGAGATGCTTG ATCTGGCAGAGATTCCTTTGTTGGCAAGCGATCGTGGTGATCAGCCCCTGAATGATTTAGCAGCACCACCATTGATCTTT GCTGGCGGACCAACGGCTACCAGTAACCCTGAGCCCTATGCCGCTTTTTTTGATTTTGTAGCCCTTGGCGATGGTGAAGA GCTGCTGCCTGAGATTGGTTTGGTAGTGGCTGACGCTAAGGCCAATGGACTGAGTCGCTCAAGCCTTTTGCAGGACTTAG CTCAGGTGCCTGGCGTTTACGTGCCGTCGCTTTACGGTCAAGGCCCTGATGGCACCTCCATCCTTCCTTTGGAGCCTGCT GCGCCGGCCAAGATTCTGCGACGGGTGGCCAAGCCGATGCCTCACTACGCCATGGGTTTGGTTCCACATATCGAAACGGT GCATGATCGACTCAAGGTGGAGATTCGTCGCGGTTGTACTCGTGGTTGTCGTTTTTGCCAGCCCGGCATGCTCACACGTC CAGCTCGGGATGTTGATCCGGAGGCGGTGATTGAAGCAGTGCACAATGGGATGAAGCGAACGGGATATAGCGATTTTTCA TTGTTGTCGCTCAGTTGCAGCGATTACTTGGCTCTGCCAGCGGTTGGTGTGGAGTTGCGAAATCGTTTGGCTGATCAGAA TGTGACCCTTCAGCTGCCCAGCCAACGGGTCGATCGCTTTGATGATGATATCGCTCACATCGTTGGCGGTGCTCGTCAGG CCGCTCTCACCTTCGCGCCGGAGGCTGGCAGTCAGCGCTTGAGGAACGTTGTCAATAAAGGTCTTACGAACGCCGACCTG CTGCAGGGGATCCGCACGGCGATGCAGAACGGCTTTCGCAAGGTCAAGCTCTACTTCATGATCGGATTGCCGAGCGAAAC GGATGAGGATGTGCTTGGCATTGCCGATACCTGTCAGATGTTGCAGGAGCAGTGCAGGGATCTTGGGCGATTGAACCTGA AGATCACGGTTAGTAACTTCACTCCAAAGCCACATACGCCTTTTCAGTGGCACAGCGTATCTACGCAAGAACTGCAGCGA CGTCAGCAAAAGCTGCAAAAGGCATTTCAGGCGCTCAGAGGCGTAAAGGTCAATTTCACTGATGTGCGCCTCTCCGCCAT GGAGGACTTTGTCGGTCGCGGTGATCGTCGTCTCTCGTCGGTGATCGAGGCAGCCTGGCGGGCGGGTGGAGGCATGGATG CTTGGTTCGAGGCCCTTGATCGCACTTATGAGGCCTGGGTCTGGGCTATTGCAGCTGCAGGGCTGGAGGGCCGATATAGG GATCTGGAGTTAGGGAGCTGGGGAGCGACCTCAGCCCTCAATCGCGAAGATCTGAGCAGCTTCTGCGCTCAGTCTCTGCC GTGGGATCACATTGATACGGGCATTGATAAGAGCTGGCTGGCAGAGGATCTGCAGCGTGCCTTGACGGCAACGGTGGTGC CTGACTGTTCTTTCGAAGGCTGTAGCAGTTGTGGCGTCTGTGGTTCTGAAATGGGTCACAACGAGGTGGTGCCACCGCCG CCTGTGCCAGATCGGCAGCTTCAGAAAACTCCTTTAACGAAGCGAGCCTGTCGCATCCGTCTGCGATTCGCAAAAACTGG TTCGATGGCCCTTCTTAGTCATCTGGATGTCATGCGTCTGCTTGAAAGAGCACTGCGGCGCAGTGGTTTGCCAGTGAGTT ACAGCGGTGGGTTTCATTCCCTGCCCCGTTTGCAAATAGCTCTGGCTTTGCCTTTGGGGGTAGAGGCCTTTGGGGAATGG ATGGATCTCGAGTTTGTGGAGCCGGTGGAGGCCGAGACCATGCGTCAGCAGCTTCAGGCCACCTTGCCGAAGGGACTCTC TTTGCTTAGTGCGGAATCTGTGCCTGTAGGCGGTAGCAGTCTCTCTCAGTTGCTGGTTGCAGCCTCATGGCGCTTTGATT TGGCTATTGAGTCTGAGAAGCCATCGACGTGGCATCAGTGGCAAGTAGCTGTCGAGTTCTTGAAGGAAGCTCATGAACTG CTGTGGCATGACATTGATAAGAAGGGACGGCCGCGTCAACGAGACTGCCGGCCAGCATTGCGTGAACTTCAACTGTGCAA CAGTTGCGAAGAGGGAGGTGAGTCTCTTTGCTTAGACGCCGTTCAACTGCGTCTGGAGGCAAGTATTGATTCGATGGGCC GTAGCCTTAAACCTGTTCAGGTGCAGCATTGGCTTGCAGAGCAGATGGGTGAGCCCTTGCGCATGAGCGGTGTGCAAAGG CAGGAACTCAAGTTGCTGCAGTGTTAG
Upstream 100 bases:
>100_bases ATGAGCTGGCAGTCTTGGCAGGCATCTTGCTACGTCACGGGGCCTTGCGCTGTGTCGGGGGGGTGGCCAGCGTTGTCCAT ACGATGGGATTAGTGCCCTC
Downstream 100 bases:
>100_bases AGTCAAAATATGACGTGAATGCAGGGGCAATTTTTGCCACTGGTCCGTCCCGGCCTTCTTCACTCCAATTCTGAGCAAAG CGAGGCTATTTGCTGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 888; Mature: 887
Protein sequence:
>888_residues MAMTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGASNQGHIILYSILNAVPGQLC DRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGDQPLNDLAAPPLIF AGGPTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGPDGTSILPLEPA APAKILRRVAKPMPHYAMGLVPHIETVHDRLKVEIRRGCTRGCRFCQPGMLTRPARDVDPEAVIEAVHNGMKRTGYSDFS LLSLSCSDYLALPAVGVELRNRLADQNVTLQLPSQRVDRFDDDIAHIVGGARQAALTFAPEAGSQRLRNVVNKGLTNADL LQGIRTAMQNGFRKVKLYFMIGLPSETDEDVLGIADTCQMLQEQCRDLGRLNLKITVSNFTPKPHTPFQWHSVSTQELQR RQQKLQKAFQALRGVKVNFTDVRLSAMEDFVGRGDRRLSSVIEAAWRAGGGMDAWFEALDRTYEAWVWAIAAAGLEGRYR DLELGSWGATSALNREDLSSFCAQSLPWDHIDTGIDKSWLAEDLQRALTATVVPDCSFEGCSSCGVCGSEMGHNEVVPPP PVPDRQLQKTPLTKRACRIRLRFAKTGSMALLSHLDVMRLLERALRRSGLPVSYSGGFHSLPRLQIALALPLGVEAFGEW MDLEFVEPVEAETMRQQLQATLPKGLSLLSAESVPVGGSSLSQLLVAASWRFDLAIESEKPSTWHQWQVAVEFLKEAHEL LWHDIDKKGRPRQRDCRPALRELQLCNSCEEGGESLCLDAVQLRLEASIDSMGRSLKPVQVQHWLAEQMGEPLRMSGVQR QELKLLQC
Sequences:
>Translated_888_residues MAMTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGASNQGHIILYSILNAVPGQLC DRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGDQPLNDLAAPPLIF AGGPTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGPDGTSILPLEPA APAKILRRVAKPMPHYAMGLVPHIETVHDRLKVEIRRGCTRGCRFCQPGMLTRPARDVDPEAVIEAVHNGMKRTGYSDFS LLSLSCSDYLALPAVGVELRNRLADQNVTLQLPSQRVDRFDDDIAHIVGGARQAALTFAPEAGSQRLRNVVNKGLTNADL LQGIRTAMQNGFRKVKLYFMIGLPSETDEDVLGIADTCQMLQEQCRDLGRLNLKITVSNFTPKPHTPFQWHSVSTQELQR RQQKLQKAFQALRGVKVNFTDVRLSAMEDFVGRGDRRLSSVIEAAWRAGGGMDAWFEALDRTYEAWVWAIAAAGLEGRYR DLELGSWGATSALNREDLSSFCAQSLPWDHIDTGIDKSWLAEDLQRALTATVVPDCSFEGCSSCGVCGSEMGHNEVVPPP PVPDRQLQKTPLTKRACRIRLRFAKTGSMALLSHLDVMRLLERALRRSGLPVSYSGGFHSLPRLQIALALPLGVEAFGEW MDLEFVEPVEAETMRQQLQATLPKGLSLLSAESVPVGGSSLSQLLVAASWRFDLAIESEKPSTWHQWQVAVEFLKEAHEL LWHDIDKKGRPRQRDCRPALRELQLCNSCEEGGESLCLDAVQLRLEASIDSMGRSLKPVQVQHWLAEQMGEPLRMSGVQR QELKLLQC >Mature_887_residues AMTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGASNQGHIILYSILNAVPGQLCD RAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGDQPLNDLAAPPLIFA GGPTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGPDGTSILPLEPAA PAKILRRVAKPMPHYAMGLVPHIETVHDRLKVEIRRGCTRGCRFCQPGMLTRPARDVDPEAVIEAVHNGMKRTGYSDFSL LSLSCSDYLALPAVGVELRNRLADQNVTLQLPSQRVDRFDDDIAHIVGGARQAALTFAPEAGSQRLRNVVNKGLTNADLL QGIRTAMQNGFRKVKLYFMIGLPSETDEDVLGIADTCQMLQEQCRDLGRLNLKITVSNFTPKPHTPFQWHSVSTQELQRR QQKLQKAFQALRGVKVNFTDVRLSAMEDFVGRGDRRLSSVIEAAWRAGGGMDAWFEALDRTYEAWVWAIAAAGLEGRYRD LELGSWGATSALNREDLSSFCAQSLPWDHIDTGIDKSWLAEDLQRALTATVVPDCSFEGCSSCGVCGSEMGHNEVVPPPP VPDRQLQKTPLTKRACRIRLRFAKTGSMALLSHLDVMRLLERALRRSGLPVSYSGGFHSLPRLQIALALPLGVEAFGEWM DLEFVEPVEAETMRQQLQATLPKGLSLLSAESVPVGGSSLSQLLVAASWRFDLAIESEKPSTWHQWQVAVEFLKEAHELL WHDIDKKGRPRQRDCRPALRELQLCNSCEEGGESLCLDAVQLRLEASIDSMGRSLKPVQVQHWLAEQMGEPLRMSGVQRQ ELKLLQC
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 98241; Mature: 98109
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGA CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHCCC SNQGHIILYSILNAVPGQLCDRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSL CCCCCEEHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH CYELGATNILEMLDLAEIPLLASDRGDQPLNDLAAPPLIFAGGPTATSNPEPYAAFFDFV HHHHCHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH ALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGPDGTSILPLEPA HCCCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCC APAKILRRVAKPMPHYAMGLVPHIETVHDRLKVEIRRGCTRGCRFCQPGMLTRPARDVDP CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH EAVIEAVHNGMKRTGYSDFSLLSLSCSDYLALPAVGVELRNRLADQNVTLQLPSQRVDRF HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH DDDIAHIVGGARQAALTFAPEAGSQRLRNVVNKGLTNADLLQGIRTAMQNGFRKVKLYFM HHHHHHHHCCCHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEE IGLPSETDEDVLGIADTCQMLQEQCRDLGRLNLKITVSNFTPKPHTPFQWHSVSTQELQR EECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH RQQKLQKAFQALRGVKVNFTDVRLSAMEDFVGRGDRRLSSVIEAAWRAGGGMDAWFEALD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH RTYEAWVWAIAAAGLEGRYRDLELGSWGATSALNREDLSSFCAQSLPWDHIDTGIDKSWL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHH AEDLQRALTATVVPDCSFEGCSSCGVCGSEMGHNEVVPPPPVPDRQLQKTPLTKRACRIR HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHEE LRFAKTGSMALLSHLDVMRLLERALRRSGLPVSYSGGFHSLPRLQIALALPLGVEAFGEW EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCHHHHHCC MDLEFVEPVEAETMRQQLQATLPKGLSLLSAESVPVGGSSLSQLLVAASWRFDLAIESEK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCC PSTWHQWQVAVEFLKEAHELLWHDIDKKGRPRQRDCRPALRELQLCNSCEEGGESLCLDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH VQLRLEASIDSMGRSLKPVQVQHWLAEQMGEPLRMSGVQRQELKLLQC HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHCC >Mature Secondary Structure AMTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGA CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHCCC SNQGHIILYSILNAVPGQLCDRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSL CCCCCEEHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH CYELGATNILEMLDLAEIPLLASDRGDQPLNDLAAPPLIFAGGPTATSNPEPYAAFFDFV HHHHCHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH ALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGPDGTSILPLEPA HCCCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCC APAKILRRVAKPMPHYAMGLVPHIETVHDRLKVEIRRGCTRGCRFCQPGMLTRPARDVDP CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH EAVIEAVHNGMKRTGYSDFSLLSLSCSDYLALPAVGVELRNRLADQNVTLQLPSQRVDRF HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH DDDIAHIVGGARQAALTFAPEAGSQRLRNVVNKGLTNADLLQGIRTAMQNGFRKVKLYFM HHHHHHHHCCCHHHEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEE IGLPSETDEDVLGIADTCQMLQEQCRDLGRLNLKITVSNFTPKPHTPFQWHSVSTQELQR EECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH RQQKLQKAFQALRGVKVNFTDVRLSAMEDFVGRGDRRLSSVIEAAWRAGGGMDAWFEALD HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH RTYEAWVWAIAAAGLEGRYRDLELGSWGATSALNREDLSSFCAQSLPWDHIDTGIDKSWL HHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCHHHH AEDLQRALTATVVPDCSFEGCSSCGVCGSEMGHNEVVPPPPVPDRQLQKTPLTKRACRIR HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHEE LRFAKTGSMALLSHLDVMRLLERALRRSGLPVSYSGGFHSLPRLQIALALPLGVEAFGEW EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCHHHHHCC MDLEFVEPVEAETMRQQLQATLPKGLSLLSAESVPVGGSSLSQLLVAASWRFDLAIESEK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCC PSTWHQWQVAVEFLKEAHELLWHDIDKKGRPRQRDCRPALRELQLCNSCEEGGESLCLDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH VQLRLEASIDSMGRSLKPVQVQHWLAEQMGEPLRMSGVQRQELKLLQC HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]