Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is psaL [H]

Identifier: 33864035

GI number: 33864035

Start: 1858412

End: 1858975

Strand: Direct

Name: psaL [H]

Synonym: PMT1768

Alternate gene names: 33864035

Gene position: 1858412-1858975 (Clockwise)

Preceding gene: 33864034

Following gene: 33864038

Centisome position: 77.08

GC content: 54.26

Gene sequence:

>564_bases
ATGACTGACGAGAACCTGCCCCTAGGCCCCAAGACGCTCAACGAAAAGTACCGTGACCGAGGGCACGTAGAAGAGTGGGC
TGTGCAGCCTGCTGCTGACCCCTGCGTCGGAAACCTGGCCACTCCAGTCAATAGTGGCTACTTCGTGAAAGCCTTAGTCA
ACAATCTTCCCCTCTATCGCGAGGGTATTTCTGCAAACTTCCGCGGCTTGGAAACTGGTGCCGCGATCGGCTACTTCATT
TACGGTCCCTTCCTTGTAATGGGTCCGTTAAGAACAACCGATTTTGCTACAACAGCAGCTTTATTGGCAACAGTTGGAGC
AGTGCATATCCTTACTGCTCTTTTAGTGCTTTACAACGTCCCCGGCAAGGCACCCACCGTGCCACCCCCGGACGTCACTG
TTGCTAACCCTCCTGCCGACCTGTTCACAAGGAAAGGCTGGGCAGACTTCACAAGTGGCTTTTGGCTGGGTGGCTGCGCG
GGCGCGGCCTTTGCATGGTTCCTATGCAACACTTTGCACATGCAACCACTGCTGAATGTTCCCATGAATGTCTGGGCTTC
TTAA

Upstream 100 bases:

>100_bases
TGACACCGGCAATTTTCATTGTCCTAGTGGGTCGCCATATCACAGCTACCGACTGAGCTGTAGACGCTTAACCCCAGCCA
ACCGACTCCCCTAATGCCGA

Downstream 100 bases:

>100_bases
GAATCAAGAAGCTTTCACATCATCAAATCGAAAAGTAAAAAATCTTCTCCTGGGGTGGCTTGATTGCTTCCCCAGGTTTT
TTATTGCTTCAAGAATGCCA

Product: photosystem I reaction center protein subunit XI

Products: NA

Alternate protein names: PSI subunit V; PSI-L [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTDENLPLGPKTLNEKYRDRGHVEEWAVQPAADPCVGNLATPVNSGYFVKALVNNLPLYREGISANFRGLETGAAIGYFI
YGPFLVMGPLRTTDFATTAALLATVGAVHILTALLVLYNVPGKAPTVPPPDVTVANPPADLFTRKGWADFTSGFWLGGCA
GAAFAWFLCNTLHMQPLLNVPMNVWAS

Sequences:

>Translated_187_residues
MTDENLPLGPKTLNEKYRDRGHVEEWAVQPAADPCVGNLATPVNSGYFVKALVNNLPLYREGISANFRGLETGAAIGYFI
YGPFLVMGPLRTTDFATTAALLATVGAVHILTALLVLYNVPGKAPTVPPPDVTVANPPADLFTRKGWADFTSGFWLGGCA
GAAFAWFLCNTLHMQPLLNVPMNVWAS
>Mature_186_residues
TDENLPLGPKTLNEKYRDRGHVEEWAVQPAADPCVGNLATPVNSGYFVKALVNNLPLYREGISANFRGLETGAAIGYFIY
GPFLVMGPLRTTDFATTAALLATVGAVHILTALLVLYNVPGKAPTVPPPDVTVANPPADLFTRKGWADFTSGFWLGGCAG
AAFAWFLCNTLHMQPLLNVPMNVWAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003757
- InterPro:   IPR022980
- ProDom:   PD005947 [H]

Pfam domain/function: PF02605 PsaL [H]

EC number: NA

Molecular weight: Translated: 20078; Mature: 19947

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDENLPLGPKTLNEKYRDRGHVEEWAVQPAADPCVGNLATPVNSGYFVKALVNNLPLYR
CCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHH
EGISANFRGLETGAAIGYFIYGPFLVMGPLRTTDFATTAALLATVGAVHILTALLVLYNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGKAPTVPPPDVTVANPPADLFTRKGWADFTSGFWLGGCAGAAFAWFLCNTLHMQPLLNV
CCCCCCCCCCCCEECCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PMNVWAS
CHHHCCC
>Mature Secondary Structure 
TDENLPLGPKTLNEKYRDRGHVEEWAVQPAADPCVGNLATPVNSGYFVKALVNNLPLYR
CCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHH
EGISANFRGLETGAAIGYFIYGPFLVMGPLRTTDFATTAALLATVGAVHILTALLVLYNV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGKAPTVPPPDVTVANPPADLFTRKGWADFTSGFWLGGCAGAAFAWFLCNTLHMQPLLNV
CCCCCCCCCCCCEECCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PMNVWAS
CHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA