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The map label for this gene is yddH [H]

Identifier: 33864032

GI number: 33864032

Start: 1855914

End: 1856666

Strand: Direct

Name: yddH [H]

Synonym: PMT1765

Alternate gene names: 33864032

Gene position: 1855914-1856666 (Clockwise)

Preceding gene: 33864030

Following gene: 33864033

Centisome position: 76.98

GC content: 58.96

Gene sequence:

>753_bases
ATGCCGACCCTAGGCACCCCAATCACCACTGACCTTCTTGCTCCAGGCAGCTGCTGGCAACTGCAAAAGGGAGTCAACGG
TTATGCCGGTGTCGAAGGAGCAGGACTGGCCACCCAGGCGGCCGCAGGCCGAAGCTTTGAAGTGCTCGATGCAGCGAAGC
CCAACACATATCAACAGCCAGTAACACGGCTACGGGTGCGGCTACTGGAAGACGGATACCCCTGCTGGATTGATCTGCGC
GAAGTGAACGGCCAGATCATTCAACGGGGACGCTGGCGACCTCAACTGCTTGCCATCAGAGAGATCCGGCAACGACTAGC
GGCTGTGATGACCTGGGTGGAGGCAGCAGCCAACCAGCCAAACACTTACCTATGGGGCGGCAGCATCGGGCCAGATTTTG
ACTGCTCTGGCCTTGTACAGACCGCCTTTGCTAGTCAAGGCATCTGGCTACCGCGCGACGCCTATCAGCAGGAAAGGTTC
TGTACGCCAATAACTGTGCAACCTGACAACACCAAACAACTCCGCCCTGGAGATCTGATTTTCTTCGGCAGTCGAAAACA
CTGCAGCCACGTTGGCGTATATGGAGGCAACGGAAGCTACTGGCATAGCTCCGGTCAAGAGCATGGACGCAACGGCATCG
GTTGCGATCGGCTGCCTGCCAACGACACCCATCCAGTGGCCTGCTACTACCGAGCTGAGCTGCGCGGGGCGGGGCGAGTG
GAACGCTGCCATGACGGAACCACCCTCCCCTGA

Upstream 100 bases:

>100_bases
CAGGGCGCCTCTCTGCCGCCAATCGATCTAACAGCCCCTTTAGCTGAGCCTGCATAGCACTATCGGGGCGGTAGAACGCC
ATTGCTAATCACTTCAGGCA

Downstream 100 bases:

>100_bases
AGGGCAGCGCCTAAGTTGCTCTCTACTGCGGAAGGCCTCCGGCATGCCCTCGCCCATGGACCTCTCAGTCGTAGTACCCC
TCTTCAACGAAGAGGAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPTLGTPITTDLLAPGSCWQLQKGVNGYAGVEGAGLATQAAAGRSFEVLDAAKPNTYQQPVTRLRVRLLEDGYPCWIDLR
EVNGQIIQRGRWRPQLLAIREIRQRLAAVMTWVEAAANQPNTYLWGGSIGPDFDCSGLVQTAFASQGIWLPRDAYQQERF
CTPITVQPDNTKQLRPGDLIFFGSRKHCSHVGVYGGNGSYWHSSGQEHGRNGIGCDRLPANDTHPVACYYRAELRGAGRV
ERCHDGTTLP

Sequences:

>Translated_250_residues
MPTLGTPITTDLLAPGSCWQLQKGVNGYAGVEGAGLATQAAAGRSFEVLDAAKPNTYQQPVTRLRVRLLEDGYPCWIDLR
EVNGQIIQRGRWRPQLLAIREIRQRLAAVMTWVEAAANQPNTYLWGGSIGPDFDCSGLVQTAFASQGIWLPRDAYQQERF
CTPITVQPDNTKQLRPGDLIFFGSRKHCSHVGVYGGNGSYWHSSGQEHGRNGIGCDRLPANDTHPVACYYRAELRGAGRV
ERCHDGTTLP
>Mature_249_residues
PTLGTPITTDLLAPGSCWQLQKGVNGYAGVEGAGLATQAAAGRSFEVLDAAKPNTYQQPVTRLRVRLLEDGYPCWIDLRE
VNGQIIQRGRWRPQLLAIREIRQRLAAVMTWVEAAANQPNTYLWGGSIGPDFDCSGLVQTAFASQGIWLPRDAYQQERFC
TPITVQPDNTKQLRPGDLIFFGSRKHCSHVGVYGGNGSYWHSSGQEHGRNGIGCDRLPANDTHPVACYYRAELRGAGRVE
RCHDGTTLP

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 27523; Mature: 27392

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLGTPITTDLLAPGSCWQLQKGVNGYAGVEGAGLATQAAAGRSFEVLDAAKPNTYQQP
CCCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHH
VTRLRVRLLEDGYPCWIDLREVNGQIIQRGRWRPQLLAIREIRQRLAAVMTWVEAAANQP
HHHHHHHHHHCCCCEEEEHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NTYLWGGSIGPDFDCSGLVQTAFASQGIWLPRDAYQQERFCTPITVQPDNTKQLRPGDLI
CEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEE
FFGSRKHCSHVGVYGGNGSYWHSSGQEHGRNGIGCDRLPANDTHPVACYYRAELRGAGRV
EECCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
ERCHDGTTLP
HHHCCCCCCC
>Mature Secondary Structure 
PTLGTPITTDLLAPGSCWQLQKGVNGYAGVEGAGLATQAAAGRSFEVLDAAKPNTYQQP
CCCCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHH
VTRLRVRLLEDGYPCWIDLREVNGQIIQRGRWRPQLLAIREIRQRLAAVMTWVEAAANQP
HHHHHHHHHHCCCCEEEEHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
NTYLWGGSIGPDFDCSGLVQTAFASQGIWLPRDAYQQERFCTPITVQPDNTKQLRPGDLI
CEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCEE
FFGSRKHCSHVGVYGGNGSYWHSSGQEHGRNGIGCDRLPANDTHPVACYYRAELRGAGRV
EECCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
ERCHDGTTLP
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]