| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863976
Identifier: 33863976
GI number: 33863976
Start: 1808666
End: 1810060
Strand: Direct
Name: 33863976
Synonym: PMT1709
Alternate gene names: NA
Gene position: 1808666-1810060 (Clockwise)
Preceding gene: 33863975
Following gene: 33863977
Centisome position: 75.02
GC content: 55.34
Gene sequence:
>1395_bases GTGAGCGATTCCATCTCGCTCATCACGATCCAACAACGGCTTGCAGAAGGTGTCACTCCTGGCCGCGTCGATGAAGCCAC CGTTCGACGCCTGTGGTGGGCAGCTCTGGACACCTTGCAAGACGACATCCTGCTGCCCATGGATCCTGAAAAGGGGCTTT GGCTGGCAGCACCCCTACCTGCGCTCTATGAGCCAAGACTGCTCGAACGCTTAAAAGGATGGGTCTGGGCACCAGACGAG CTCGAAACACTCCATTCTCCTCAAGGCGGCCTCTTGCCTCCCAGTCGCGTCAGGTCATCAATCAATGAGAGAAGCAATTC AGCTGTCGGGGGCTATCAACGGTTACCACTGCGCCAAAACGATGGTCATGAGCCCCTTCTGCTGATCATTACCCCGGATG TTCAAATTGCCCTGGCCCTGCATGGCAAACCCGCAGAGCGCCATCTGTTAATGCGCAGTGATCCAGAAACCCTCAGTGAT CTCTTGAAGATGCTGGACCTGAGACTAAACAGCGAAGACCCTGGCCATGCCATTGAGCTTCGTCAGGCTTTGGCAAACCT AGGACCTTTACAAAGTAATCCTGAACTAGAAAAAATCTTCTGGCCTCGACTTGCGGAACGGTTGGCCGGCATGGCCCCAA GTCTCACAATGCAACCGATTCCTGAAAGATCACACCCGGCCAAGTCCAGAGGAGAAACCAATCAAGAAACGAGTGCTGAA CTCATTCTGCTGGAGGCACTCACTCATGAGGTGCGAACCCCACTAGCGACCATCCGAACCCTGATCCACTCCCTGCTGCG GCGAAGTGACCTTCCTGGTGTCGTAGTCAACCGTCTCAAACAGATCGATGCTGAGTGCACTGAGCAAATTGATCGATTCG GCCTCATTTTTCATGCCGCAGAACTTCAGCGGCAGCCGCCAGAAGCGTCCATGCTCGCCCATACCGACCTCGGCGCCATG CTGATAATGCTTCATCCAGCCTGGCGTCAGCAGCTCGAACGCCGCGGGGTAGGACTCCAGATCGATATCACCCCTGATTT GCCAGAAGTTCTTAGTGATCCAAGACGTCTTGAACCGATGCTGGGTGGATTAATTGATCGCACGAGCCGCGGCCTGCCAG CAGGTGGCAGCCTATCGCTCACGCTTCGCCCTGCGGGCCCCCGCCTAAAGCTTCAAATCCTCAGCCAAATACCAAATCAT GAAGATCAAGGAGCCAGCAGTAGGGATCAAAAGGCTGCTCTAGGCCCAGTGCTGAGCTGGGACCCCAAAACCGGCAGCCT GCAACTCAGCCAAGCAGCAACCCAACGAATGCTGGCTAGCTTGGGTGGGTGGCTAACACAGCGTCGGGACAAAGGGCTCA CAGTATTTTTTCCCATCGCTGAGGAAAAACTTTGA
Upstream 100 bases:
>100_bases CATTTATGAGCTATGGCCGCTCAGCAATGGTGGTGAACTTCGTAGCACTTGGACTCTGCCTTTCGGTGGCACGCCGAGGT CACACAAGACTCAACAACTG
Downstream 100 bases:
>100_bases ACTCCAAAACAAGCCACAATGTTGACGGGTGTGAAGCTTGCTGCCAAGCAGTGCCATAGGGCACAAAACGCAGTGCTACT TTTCACCAGTAACGGTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase; Sensor Histidine Kinase; Signal Transduction Histidine Kinase; Histidine Kinase A Domain Protein; Two Component System Sensor Histidine Kinase; Sensory Transduction Histidine Kinase
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSDSISLITIQQRLAEGVTPGRVDEATVRRLWWAALDTLQDDILLPMDPEKGLWLAAPLPALYEPRLLERLKGWVWAPDE LETLHSPQGGLLPPSRVRSSINERSNSAVGGYQRLPLRQNDGHEPLLLIITPDVQIALALHGKPAERHLLMRSDPETLSD LLKMLDLRLNSEDPGHAIELRQALANLGPLQSNPELEKIFWPRLAERLAGMAPSLTMQPIPERSHPAKSRGETNQETSAE LILLEALTHEVRTPLATIRTLIHSLLRRSDLPGVVVNRLKQIDAECTEQIDRFGLIFHAAELQRQPPEASMLAHTDLGAM LIMLHPAWRQQLERRGVGLQIDITPDLPEVLSDPRRLEPMLGGLIDRTSRGLPAGGSLSLTLRPAGPRLKLQILSQIPNH EDQGASSRDQKAALGPVLSWDPKTGSLQLSQAATQRMLASLGGWLTQRRDKGLTVFFPIAEEKL
Sequences:
>Translated_464_residues MSDSISLITIQQRLAEGVTPGRVDEATVRRLWWAALDTLQDDILLPMDPEKGLWLAAPLPALYEPRLLERLKGWVWAPDE LETLHSPQGGLLPPSRVRSSINERSNSAVGGYQRLPLRQNDGHEPLLLIITPDVQIALALHGKPAERHLLMRSDPETLSD LLKMLDLRLNSEDPGHAIELRQALANLGPLQSNPELEKIFWPRLAERLAGMAPSLTMQPIPERSHPAKSRGETNQETSAE LILLEALTHEVRTPLATIRTLIHSLLRRSDLPGVVVNRLKQIDAECTEQIDRFGLIFHAAELQRQPPEASMLAHTDLGAM LIMLHPAWRQQLERRGVGLQIDITPDLPEVLSDPRRLEPMLGGLIDRTSRGLPAGGSLSLTLRPAGPRLKLQILSQIPNH EDQGASSRDQKAALGPVLSWDPKTGSLQLSQAATQRMLASLGGWLTQRRDKGLTVFFPIAEEKL >Mature_463_residues SDSISLITIQQRLAEGVTPGRVDEATVRRLWWAALDTLQDDILLPMDPEKGLWLAAPLPALYEPRLLERLKGWVWAPDEL ETLHSPQGGLLPPSRVRSSINERSNSAVGGYQRLPLRQNDGHEPLLLIITPDVQIALALHGKPAERHLLMRSDPETLSDL LKMLDLRLNSEDPGHAIELRQALANLGPLQSNPELEKIFWPRLAERLAGMAPSLTMQPIPERSHPAKSRGETNQETSAEL ILLEALTHEVRTPLATIRTLIHSLLRRSDLPGVVVNRLKQIDAECTEQIDRFGLIFHAAELQRQPPEASMLAHTDLGAML IMLHPAWRQQLERRGVGLQIDITPDLPEVLSDPRRLEPMLGGLIDRTSRGLPAGGSLSLTLRPAGPRLKLQILSQIPNHE DQGASSRDQKAALGPVLSWDPKTGSLQLSQAATQRMLASLGGWLTQRRDKGLTVFFPIAEEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51483; Mature: 51352
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSISLITIQQRLAEGVTPGRVDEATVRRLWWAALDTLQDDILLPMDPEKGLWLAAPLP CCCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC ALYEPRLLERLKGWVWAPDELETLHSPQGGLLPPSRVRSSINERSNSAVGGYQRLPLRQN HHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCC DGHEPLLLIITPDVQIALALHGKPAERHLLMRSDPETLSDLLKMLDLRLNSEDPGHAIEL CCCCCEEEEECCCCEEEEEECCCCHHHCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHH RQALANLGPLQSNPELEKIFWPRLAERLAGMAPSLTMQPIPERSHPAKSRGETNQETSAE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LILLEALTHEVRTPLATIRTLIHSLLRRSDLPGVVVNRLKQIDAECTEQIDRFGLIFHAA HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQRQPPEASMLAHTDLGAMLIMLHPAWRQQLERRGVGLQIDITPDLPEVLSDPRRLEPM HHHCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHH LGGLIDRTSRGLPAGGSLSLTLRPAGPRLKLQILSQIPNHEDQGASSRDQKAALGPVLSW HHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEC DPKTGSLQLSQAATQRMLASLGGWLTQRRDKGLTVFFPIAEEKL CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure SDSISLITIQQRLAEGVTPGRVDEATVRRLWWAALDTLQDDILLPMDPEKGLWLAAPLP CCCEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC ALYEPRLLERLKGWVWAPDELETLHSPQGGLLPPSRVRSSINERSNSAVGGYQRLPLRQN HHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCC DGHEPLLLIITPDVQIALALHGKPAERHLLMRSDPETLSDLLKMLDLRLNSEDPGHAIEL CCCCCEEEEECCCCEEEEEECCCCHHHCEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHH RQALANLGPLQSNPELEKIFWPRLAERLAGMAPSLTMQPIPERSHPAKSRGETNQETSAE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LILLEALTHEVRTPLATIRTLIHSLLRRSDLPGVVVNRLKQIDAECTEQIDRFGLIFHAA HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQRQPPEASMLAHTDLGAMLIMLHPAWRQQLERRGVGLQIDITPDLPEVLSDPRRLEPM HHHCCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHH LGGLIDRTSRGLPAGGSLSLTLRPAGPRLKLQILSQIPNHEDQGASSRDQKAALGPVLSW HHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEC DPKTGSLQLSQAATQRMLASLGGWLTQRRDKGLTVFFPIAEEKL CCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA