| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is metK [H]
Identifier: 33863937
GI number: 33863937
Start: 1774215
End: 1775474
Strand: Direct
Name: metK [H]
Synonym: PMT1670
Alternate gene names: 33863937
Gene position: 1774215-1775474 (Clockwise)
Preceding gene: 33863936
Following gene: 33863938
Centisome position: 73.59
GC content: 55.56
Gene sequence:
>1260_bases ATGAGCCGTTACGTCTTCACCTCTGAGTCCGTCACAGAAGGGCATCCCGACAAGATCTGTGATCAAGTGAGTGATGCCGT TCTAGACGCCCTACTCGCTCAAGACCCCAGCAGCCGAGTTGCCTGTGAAACAGTTGTCAACACAGGGCTCTGCCTCATTA CAGGCGAAGTGACCTCAAACGCCCAGGTTGATTTCATCCATCTTGTTAGGAACGTAATCCGCGAGATTGGTTATAGCGGT GCTCGTGCAGGTGGGTTTGATGCCACGAGTTGCGCCGTGCTCGTTGCCCTGGATCAACAATCACCAGACATCGCCCAAGG GGTTAATGAAGCCGACGACCATTCAGGTGATCCTCTTGACAAGGTGGGAGCAGGAGACCAAGGGATCATGTTTGGCTACG CCTGCGACGAGACCCCTGAGCTGATGCCCCTACCCATCAGCCTCGCCCATCGCCTTGCCCGTCAACTCGCTGCAGTCCGT CATGACGGGTCTCTGAGCTACTTGCTACCTGATGGGAAAACCCAAGTCAGTGTGGTCTACGAAAACGACCGTCCTGTCGC GATCGACACGATTTTGATCTCCACTCAACACACCTCGGAGGTAGAGGGCATCTCAGATGAGAATGGAATCCGTGAGCGGA TCACTCAAGACCTCTGGACCCATGTCGTAGAACCAGCGACTGCTGACCTCCCCCTCAAACCCAATCGTGAGGCGACCCGC TTTTTAGTCAATCCAACCGGTAAGTTTGTGGTGGGAGGCCCCCAGGGGGATGCTGGCCTTACTGGCCGGAAGATCATCGT AGATACCTACGGCGGCTATGCCCGCCATGGTGGTGGAGCCTTTTCCGGCAAAGACCCAACCAAAGTGGACCGCTCTGCTG CCTACGCCGCACGATTTGTGGCCAAGTGTCTTGTAGCAGCAGGCCTCGCTCAACGTGCAGAGGTGCAACTCAGCTATGCC ATTGGCGTGGCTAAACCCGTATCGATCCTAGTGGAATCTTTTGGCACCGGAAAAGTCACGAATGACGAACTCACAGCCTT GGTGCAAGACCATTTTGACCTGCGACCTGGTGCCATCATCGAACAATTCAAGCTGCGTCAGCTGCCTCAGCAACGCGGAG GACGGTTCTACCAAGACACTGCTGCCTATGGCCACTTCGGCCGCCCTGATCTAAAGCTTCCCTGGGAAGACGTTACTGAC AAGGCCTCCACTCTGCTTCAAGCAGAGGCCCAACAACAAAAACAGGGAAGCAGCCTCTAG
Upstream 100 bases:
>100_bases ACACTGACGAACTACCACCACCTCATCCACCACTGGAATGATCTAGCCGTCAAGTAGCCGTCAAGGCAGACCCTAAAATT ACGCATAACTTCAGTTCTCC
Downstream 100 bases:
>100_bases AAACCCCATGCCTAACTCGTCCCTGGCGCTCGGCATCGACCTTGGCACCAGCGGCGTACGGCTTGCCGTGCTCAACGAGC ACGGCAAGCTGATCCACACA
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNAQVDFIHLVRNVIREIGYSG ARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLDKVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVR HDGSLSYLLPDGKTQVSVVYENDRPVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATR FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKCLVAAGLAQRAEVQLSYA IGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAIIEQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTD KASTLLQAEAQQQKQGSSL
Sequences:
>Translated_419_residues MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNAQVDFIHLVRNVIREIGYSG ARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLDKVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVR HDGSLSYLLPDGKTQVSVVYENDRPVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATR FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKCLVAAGLAQRAEVQLSYA IGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAIIEQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTD KASTLLQAEAQQQKQGSSL >Mature_418_residues SRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSNAQVDFIHLVRNVIREIGYSGA RAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLDKVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVRH DGSLSYLLPDGKTQVSVVYENDRPVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATRF LVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKCLVAAGLAQRAEVQLSYAI GVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAIIEQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTDK ASTLLQAEAQQQKQGSSL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=397, Percent_Identity=54.1561712846348, Blast_Score=388, Evalue=1e-108, Organism=Homo sapiens, GI4557737, Length=397, Percent_Identity=54.4080604534005, Blast_Score=384, Evalue=1e-107, Organism=Escherichia coli, GI1789311, Length=408, Percent_Identity=56.3725490196078, Blast_Score=447, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17551082, Length=399, Percent_Identity=53.1328320802005, Blast_Score=393, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17538498, Length=398, Percent_Identity=53.0150753768844, Blast_Score=390, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538494, Length=399, Percent_Identity=53.3834586466165, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI25145633, Length=399, Percent_Identity=53.6340852130326, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565905, Length=398, Percent_Identity=47.9899497487437, Blast_Score=329, Evalue=1e-90, Organism=Caenorhabditis elegans, GI32565911, Length=371, Percent_Identity=48.7870619946092, Blast_Score=312, Evalue=2e-85, Organism=Caenorhabditis elegans, GI25145635, Length=351, Percent_Identity=51.5669515669516, Blast_Score=310, Evalue=1e-84, Organism=Caenorhabditis elegans, GI32565903, Length=324, Percent_Identity=50.6172839506173, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI32565909, Length=101, Percent_Identity=56.4356435643564, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI32565907, Length=40, Percent_Identity=75, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=397, Percent_Identity=52.3929471032746, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6320710, Length=397, Percent_Identity=52.1410579345088, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI45552159, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580529, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580537, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580533, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580535, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580531, Length=398, Percent_Identity=51.0050251256281, Blast_Score=355, Evalue=4e-98, Organism=Drosophila melanogaster, GI24580527, Length=398, Percent_Identity=50.5025125628141, Blast_Score=348, Evalue=3e-96, Organism=Drosophila melanogaster, GI24580525, Length=398, Percent_Identity=50.5025125628141, Blast_Score=348, Evalue=3e-96, Organism=Drosophila melanogaster, GI24580541, Length=385, Percent_Identity=49.6103896103896, Blast_Score=327, Evalue=7e-90, Organism=Drosophila melanogaster, GI24580539, Length=124, Percent_Identity=54.0322580645161, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 44972; Mature: 44841
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSN CCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCC AQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCHH KVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVRHDGSLSYLLPDGKTQVSVVY HHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEE ENDRPVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATR ECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AKCLVAAGLAQRAEVQLSYAIGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAII HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHH EQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTDKASTLLQAEAQQQKQGSSL HHHHHHHCHHHHCCCEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRYVFTSESVTEGHPDKICDQVSDAVLDALLAQDPSSRVACETVVNTGLCLITGEVTSN CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCC AQVDFIHLVRNVIREIGYSGARAGGFDATSCAVLVALDQQSPDIAQGVNEADDHSGDPLD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCHH KVGAGDQGIMFGYACDETPELMPLPISLAHRLARQLAAVRHDGSLSYLLPDGKTQVSVVY HHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEE ENDRPVAIDTILISTQHTSEVEGISDENGIRERITQDLWTHVVEPATADLPLKPNREATR ECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE FLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFV EEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AKCLVAAGLAQRAEVQLSYAIGVAKPVSILVESFGTGKVTNDELTALVQDHFDLRPGAII HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHH EQFKLRQLPQQRGGRFYQDTAAYGHFGRPDLKLPWEDVTDKASTLLQAEAQQQKQGSSL HHHHHHHCHHHHCCCEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA