| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is gph [C]
Identifier: 33863936
GI number: 33863936
Start: 1773395
End: 1774171
Strand: Direct
Name: gph [C]
Synonym: PMT1669
Alternate gene names: 33863936
Gene position: 1773395-1774171 (Clockwise)
Preceding gene: 33863935
Following gene: 33863937
Centisome position: 73.56
GC content: 54.31
Gene sequence:
>777_bases ATGCCTCAACTATTGCTGAGGGGGACGCCCATCGGCAAGATCCAAGGGGTGCTGTTCGACAAGGATGGCACCCTTTGCCA TAGCGAACCCCATCTGCTCACTCTGGCAAAGGGAAGAATCGAACAAGCCATTCGTCGGTTTCACGGAGGGAATGCCAGCG AAAGTGTGGTTTGCAAAATTGAGGAGCTTCTCTCTGCTGCCTATGGCCTCAACGCTGAAGGACTCGATCCAGGCGGAACG ATCGCCGTAGCGTCAAGGCATCACAACTTAATCTCCACAGCAACGGTGTTCTGTCTGCTCGGAGAAGGCTGGCCACAGGC TCTTGCTCTGGCCAATGAAGTGTTCGCAGCTGTGGATGCTCTTGAGAATGAAGTGCCCTGCCTAGTAACAAAAAGGACTC TGCTACCAGGTGCCCTTACGGTCTTGCAAGCGCTGCGACAACAAGGGGTGACCTGCGCCGTGATTAGCAATGACAGCGCC TCAGGGATTGAGACGTTCCTGAACCAAAACAATCTTCATGACACGGTGACCGAGCTCTGGAGCGCTGAGCATCGACCAGC TAAGCCCAATCCAAATGCCGTCAAAAGACTCTGCCAGTTAATGGGATTAGCCCCCGCCCAGTGCGCCTTGATTGGTGATG CCGATTCCGATTTACAGATGGCTCGACAGGCTGGTATAGGTCTCAGCCTTGGTTACATGGCCGGCTGGAATCAACCCCCA ACACTGACGAACTACCACCACCTCATCCACCACTGGAATGATCTAGCCGTCAAGTAG
Upstream 100 bases:
>100_bases GAAGAAATGGCCGCCCGCTACAAGCAAATGCTGCTCGAGCAGGCCGAGGAAGGCGAAGATCCAGAAGTTGTCCCCCTCGA CTAATCCTGATAGCTAGCCC
Downstream 100 bases:
>100_bases CCGTCAAGGCAGACCCTAAAATTACGCATAACTTCAGTTCTCCATGAGCCGTTACGTCTTCACCTCTGAGTCCGTCACAG AAGGGCATCCCGACAAGATC
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Phosphatase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Phosphatase; HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase; Haloacid Dehalogenase/Epoxide Hydrolase Family
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPQLLLRGTPIGKIQGVLFDKDGTLCHSEPHLLTLAKGRIEQAIRRFHGGNASESVVCKIEELLSAAYGLNAEGLDPGGT IAVASRHHNLISTATVFCLLGEGWPQALALANEVFAAVDALENEVPCLVTKRTLLPGALTVLQALRQQGVTCAVISNDSA SGIETFLNQNNLHDTVTELWSAEHRPAKPNPNAVKRLCQLMGLAPAQCALIGDADSDLQMARQAGIGLSLGYMAGWNQPP TLTNYHHLIHHWNDLAVK
Sequences:
>Translated_258_residues MPQLLLRGTPIGKIQGVLFDKDGTLCHSEPHLLTLAKGRIEQAIRRFHGGNASESVVCKIEELLSAAYGLNAEGLDPGGT IAVASRHHNLISTATVFCLLGEGWPQALALANEVFAAVDALENEVPCLVTKRTLLPGALTVLQALRQQGVTCAVISNDSA SGIETFLNQNNLHDTVTELWSAEHRPAKPNPNAVKRLCQLMGLAPAQCALIGDADSDLQMARQAGIGLSLGYMAGWNQPP TLTNYHHLIHHWNDLAVK >Mature_257_residues PQLLLRGTPIGKIQGVLFDKDGTLCHSEPHLLTLAKGRIEQAIRRFHGGNASESVVCKIEELLSAAYGLNAEGLDPGGTI AVASRHHNLISTATVFCLLGEGWPQALALANEVFAAVDALENEVPCLVTKRTLLPGALTVLQALRQQGVTCAVISNDSAS GIETFLNQNNLHDTVTELWSAEHRPAKPNPNAVKRLCQLMGLAPAQCALIGDADSDLQMARQAGIGLSLGYMAGWNQPPT LTNYHHLIHHWNDLAVK
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 27667; Mature: 27536
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLLLRGTPIGKIQGVLFDKDGTLCHSEPHLLTLAKGRIEQAIRRFHGGNASESVVCKI CCCCEECCCCCCCEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHH EELLSAAYGLNAEGLDPGGTIAVASRHHNLISTATVFCLLGEGWPQALALANEVFAAVDA HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LENEVPCLVTKRTLLPGALTVLQALRQQGVTCAVISNDSASGIETFLNQNNLHDTVTELW HCCCCCEEEEHHHHCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHH SAEHRPAKPNPNAVKRLCQLMGLAPAQCALIGDADSDLQMARQAGIGLSLGYMAGWNQPP CCCCCCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHCCCCEEEHHHCCCCCCC TLTNYHHLIHHWNDLAVK CCCHHHHHHHHHHHHCCC >Mature Secondary Structure PQLLLRGTPIGKIQGVLFDKDGTLCHSEPHLLTLAKGRIEQAIRRFHGGNASESVVCKI CCCEECCCCCCCEEEEEECCCCCEECCCCCEEEEHHHHHHHHHHHHCCCCCCCHHHHHH EELLSAAYGLNAEGLDPGGTIAVASRHHNLISTATVFCLLGEGWPQALALANEVFAAVDA HHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LENEVPCLVTKRTLLPGALTVLQALRQQGVTCAVISNDSASGIETFLNQNNLHDTVTELW HCCCCCEEEEHHHHCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHH SAEHRPAKPNPNAVKRLCQLMGLAPAQCALIGDADSDLQMARQAGIGLSLGYMAGWNQPP CCCCCCCCCCHHHHHHHHHHHCCCCHHEEEECCCCHHHHHHHHCCCCEEEHHHCCCCCCC TLTNYHHLIHHWNDLAVK CCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA