| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hemK [C]
Identifier: 33863927
GI number: 33863927
Start: 1765858
End: 1766778
Strand: Reverse
Name: hemK [C]
Synonym: PMT1660
Alternate gene names: 33863927
Gene position: 1766778-1765858 (Counterclockwise)
Preceding gene: 33863928
Following gene: 33863926
Centisome position: 73.28
GC content: 54.18
Gene sequence:
>921_bases ATGGCATTGCTGGAGATTTCCGCAGCAGAGCTATTGGCCTGGCGTCGTTTGCAGTTGGCTGAAGGAGGCCGTGCTGTTGA TTTTGACTGGTTGCTTGATTTGGGTGGAGGTTTGCGCTGGAGCGATCTTCAGCAGCTTTATCTCGACCCACGCCGTTCAG TGCTGCTTGAGCGATCTCTTGATCAGCTCGAAATGATCTGGAAGCAACATCTTGATCATCACATTCCTCTTCAGCATTTG ATCGGTTACTGCCCTTGGAGGGATTTTGAGCTGGAGGTCAGTGCGGTGGCATTGATTCCCCGACAAGAGACGGAGCTGTT GGTGGATTTTGCTTTGCAAGCATTGGTTCGGAAACCTTTTGGTCGCTGGGCCGATTTGGGGACAGGGTCAGGAGCACTAG CTGTGGCGTTGGCTCGCGCTCTCCCTGTTTGGCGAGGACATGCAGTGGATTGCAGCATCGAGGCCTTGGCTTTGGCGAAA CGGAACTTGCAAAGGCTTGCGCCCCATGCCTTATGGCAGCTGCATCAGGGCAGTTGGTGGGAGCCTTTGCGGCCTTGGTG GGGAGAGTTCAGCTTGGTACTGGTCAATCCTCCCTACATCCCAGAAGTTGTAATGGCTCAACTTGAACCCGTGGTCCGTG ATCATGAGCCGCATTTGGCTCTATACGGGGGAGCCGATGGGTTGGTGGCCACTCGTCAAATCATTGCTGGTGCCATGCAG GCCTTAGAGCCTGGTGGTTGGCTGTTCTTGGAACACCACCATGACCAGAGCGATGCCGTGCTGGCTTTGATGCGTCAGCA GGGTTTGGAGAATGTGGACTACAAGTCAGATTTACTGGGGGTAAGGCGCTTTGCCATTGCTCGGCATCCTGATTATCAAG ACTCTTTGAACCATGGCAGTTCTGCCCTCGGCTGTTCTTGA
Upstream 100 bases:
>100_bases GTCTTCGGCGCGATTGACAGAACAATTGCTTCAGTTGGAGCTGCAGGGGGTTTTGGTGGCAGAGCCTGGGTTGTATTGGC GTTTGGCCTAGCCTGTTTCG
Downstream 100 bases:
>100_bases CGCCAGTGCCTTGGCATCCAGATTGCATGCTGGTTCAGCGGCATTGTTGCCCACAGACACCTTGCCAGCTTTGGCGGCCG CTCCTGTTCACGCTGCACAG
Product: SAM-binding motif-containing protein
Products: Protoporphyrin IX; H2O
Alternate protein names: M.Ssp6803HemKP [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MALLEISAAELLAWRRLQLAEGGRAVDFDWLLDLGGGLRWSDLQQLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHL IGYCPWRDFELEVSAVALIPRQETELLVDFALQALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLALYGGADGLVATRQIIAGAMQ ALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLGVRRFAIARHPDYQDSLNHGSSALGCS
Sequences:
>Translated_306_residues MALLEISAAELLAWRRLQLAEGGRAVDFDWLLDLGGGLRWSDLQQLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHL IGYCPWRDFELEVSAVALIPRQETELLVDFALQALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLALYGGADGLVATRQIIAGAMQ ALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLGVRRFAIARHPDYQDSLNHGSSALGCS >Mature_305_residues ALLEISAAELLAWRRLQLAEGGRAVDFDWLLDLGGGLRWSDLQQLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHLI GYCPWRDFELEVSAVALIPRQETELLVDFALQALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAKR NLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLALYGGADGLVATRQIIAGAMQA LEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLGVRRFAIARHPDYQDSLNHGSSALGCS
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=227, Percent_Identity=30.3964757709251, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1787463, Length=235, Percent_Identity=35.3191489361702, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082085, Length=184, Percent_Identity=30.4347826086957, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24582226, Length=220, Percent_Identity=30, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 1.3.3.4
Molecular weight: Translated: 34461; Mature: 34330
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLEISAAELLAWRRLQLAEGGRAVDFDWLLDLGGGLRWSDLQQLYLDPRRSVLLERSL CCEEEHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHH DQLEMIWKQHLDHHIPLQHLIGYCPWRDFELEVSAVALIPRQETELLVDFALQALVRKPF HHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC GRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAKRNLQRLAPHALWQLHQGSWW CHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLALYGGADGLVATRQIIAGAMQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH ALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLGVRRFAIARHPDYQDSLNHGS HCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCC SALGCS CCCCCC >Mature Secondary Structure ALLEISAAELLAWRRLQLAEGGRAVDFDWLLDLGGGLRWSDLQQLYLDPRRSVLLERSL CEEEHHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHH DQLEMIWKQHLDHHIPLQHLIGYCPWRDFELEVSAVALIPRQETELLVDFALQALVRKPF HHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC GRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAKRNLQRLAPHALWQLHQGSWW CHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLALYGGADGLVATRQIIAGAMQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH ALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLGVRRFAIARHPDYQDSLNHGS HCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCC SALGCS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protoporphyrinogen IX; O2
Specific reaction: protoporphyrinogen-IX + 1.5 O2 = protoporphyrin-IX + 3 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]