| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863816
Identifier: 33863816
GI number: 33863816
Start: 1641232
End: 1641777
Strand: Direct
Name: 33863816
Synonym: PMT1549
Alternate gene names: NA
Gene position: 1641232-1641777 (Clockwise)
Preceding gene: 33863812
Following gene: 33863817
Centisome position: 68.08
GC content: 54.58
Gene sequence:
>546_bases GTGTCCCAGTTTCGCAGTAACCCTGCGCCTTGCTCCATGGAGGGAAGCCCGAACGATTTGAGAGTGCTTAAGTTTGCCAA ACCCCACTCTTCAGCTTCCATGGTTCGGCCACAAATCCTCAAAGGCAACCATGGCCTGAAGTTATGGCTGTCCCTACTCA CAGCAATGGGGCTGAGTTTCTCACTGCAAGCTGCCAAAACCCGAGCAGGCGGTGGCGCTGCCACCCTAGGGGAACCTCTC AAAACATCAACCAGAGAACAACTGACCTTGGTTCGTCATCTCAACACCATCGGAGCCGTGTTCTACGGCTCCTGGAGCTG TCCAGCTTGTTTCTTCCAAAAAAACCTGTTCGGCCAGCAGGCGAGCACGATGCTGAACTATGTGGAATGTGGCAAACCGA AACAGCTGCCTGAACAATCAGCAGCCTGCGTAAAAGCCGAGATTCAGGCCTATCCCACCTGGCTCCTGGAAGACGGCCAG CGACGTGAAGGGGTCCAATCGATCGAGGAGTTGGCAATCTGGACCAAGATGCCTCCCAACCCTTAA
Upstream 100 bases:
>100_bases TCGCTATCGGCGTTGCGCTCAACTCCGAGAACCTTGAAATAATCCCGGTAGCCGCTGCCGGCCATGGCGTTGATTTGGCC CGAGGCCCTACATCTGTTCA
Downstream 100 bases:
>100_bases CAATGAACAGATTCTTGACACAAACGAACAAAGGAATAGCCTGAAAAATCTCAATCAAGCGAGCCCCAATCAAGCTTAAG CGTAATATTTGAAGTCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Vitamin K Epoxide Reductase Family; Protein Involved In Disulfide Bond Formation; Thioredoxin-Like
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSQFRSNPAPCSMEGSPNDLRVLKFAKPHSSASMVRPQILKGNHGLKLWLSLLTAMGLSFSLQAAKTRAGGGAATLGEPL KTSTREQLTLVRHLNTIGAVFYGSWSCPACFFQKNLFGQQASTMLNYVECGKPKQLPEQSAACVKAEIQAYPTWLLEDGQ RREGVQSIEELAIWTKMPPNP
Sequences:
>Translated_181_residues MSQFRSNPAPCSMEGSPNDLRVLKFAKPHSSASMVRPQILKGNHGLKLWLSLLTAMGLSFSLQAAKTRAGGGAATLGEPL KTSTREQLTLVRHLNTIGAVFYGSWSCPACFFQKNLFGQQASTMLNYVECGKPKQLPEQSAACVKAEIQAYPTWLLEDGQ RREGVQSIEELAIWTKMPPNP >Mature_180_residues SQFRSNPAPCSMEGSPNDLRVLKFAKPHSSASMVRPQILKGNHGLKLWLSLLTAMGLSFSLQAAKTRAGGGAATLGEPLK TSTREQLTLVRHLNTIGAVFYGSWSCPACFFQKNLFGQQASTMLNYVECGKPKQLPEQSAACVKAEIQAYPTWLLEDGQR REGVQSIEELAIWTKMPPNP
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19824; Mature: 19693
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFRSNPAPCSMEGSPNDLRVLKFAKPHSSASMVRPQILKGNHGLKLWLSLLTAMGLSF CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHHCCCCCHHHHHHHHHHHCCCC SLQAAKTRAGGGAATLGEPLKTSTREQLTLVRHLNTIGAVFYGSWSCPACFFQKNLFGQQ EEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ASTMLNYVECGKPKQLPEQSAACVKAEIQAYPTWLLEDGQRREGVQSIEELAIWTKMPPN HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCC P C >Mature Secondary Structure SQFRSNPAPCSMEGSPNDLRVLKFAKPHSSASMVRPQILKGNHGLKLWLSLLTAMGLSF CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHHCCCCCHHHHHHHHHHHCCCC SLQAAKTRAGGGAATLGEPLKTSTREQLTLVRHLNTIGAVFYGSWSCPACFFQKNLFGQQ EEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ASTMLNYVECGKPKQLPEQSAACVKAEIQAYPTWLLEDGQRREGVQSIEELAIWTKMPPN HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA