| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863790
Identifier: 33863790
GI number: 33863790
Start: 1614515
End: 1614988
Strand: Direct
Name: 33863790
Synonym: PMT1523
Alternate gene names: NA
Gene position: 1614515-1614988 (Clockwise)
Preceding gene: 33863789
Following gene: 33863792
Centisome position: 66.97
GC content: 48.52
Gene sequence:
>474_bases ATGTATCAATCACGCTTTGTAGCCCTAGGCCTGGTGATGGCCTCAGTGCTTACCCCTCAGTCAGCCATCGCCAAATGTGA ATTCCTCATGCCTATTGGCGGGGATGGCAACAAGATCGTCAAAAAGAGAGTAGAGCGGCCAAAGGGTTTAATAGGAAGTG CCTTTGGCCGCACAAACTGGAATACAGACTTTGCTGTTAATCAGCCCTATCGCAATTACAAACTATTCTTCACTGCAGAT TCAACCGATTCTGCCAGCTACCCAATTCAGGCCTTCCTCAAGTTCAGCGATGGCAGCAACCTTCAAGTTGTCAACGAATC CATGCGGCCACCAATGGGTACTGGGAAAATGTTTGGCCCTATCCAAGCAATTCCTGGCAAAGCGGTGAGTCAAGTGAATT TCAAGGTAGGAACAGCAAAGGATCCAGGCGCAACAGGATTCAGTTACCGGATTTCTGTTCAAGGCTGCCGATAA
Upstream 100 bases:
>100_bases CCTACTGGTGTTTACCTACGTGCTCAGGGCTAACTAGAATTACAATTGCGCTGCAAAATTCCAATTCCGCCATCATTATG GATGTGAATAGTCCTTTCCT
Downstream 100 bases:
>100_bases TCCAGTTGAGCCATTAGAAATTGAAAAGCAAATCGGGGAGGGTCAAGTTGCACCTTCTCCCGATTCTTGATTGATTCCTA TCAGAGGGTTCATCGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MYQSRFVALGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLIGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGATGFSYRISVQGCR
Sequences:
>Translated_157_residues MYQSRFVALGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLIGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGATGFSYRISVQGCR >Mature_157_residues MYQSRFVALGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLIGSAFGRTNWNTDFAVNQPYRNYKLFFTAD STDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGPIQAIPGKAVSQVNFKVGTAKDPGATGFSYRISVQGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17057; Mature: 17057
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQSRFVALGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLIGSAFGRTNW CCCCHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCC NTDFAVNQPYRNYKLFFTADSTDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGP CCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC IQAIPGKAVSQVNFKVGTAKDPGATGFSYRISVQGCR CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MYQSRFVALGLVMASVLTPQSAIAKCEFLMPIGGDGNKIVKKRVERPKGLIGSAFGRTNW CCCCHHHHHHHHHHHHCCCHHHHHEEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCC NTDFAVNQPYRNYKLFFTADSTDSASYPIQAFLKFSDGSNLQVVNESMRPPMGTGKMFGP CCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCC IQAIPGKAVSQVNFKVGTAKDPGATGFSYRISVQGCR CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA