| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is prmA
Identifier: 33863697
GI number: 33863697
Start: 1518113
End: 1519018
Strand: Reverse
Name: prmA
Synonym: PMT1430
Alternate gene names: 33863697
Gene position: 1519018-1518113 (Counterclockwise)
Preceding gene: 33863698
Following gene: 33863696
Centisome position: 63.01
GC content: 55.52
Gene sequence:
>906_bases ATGAACTTTGCTGCTGCTCTTCGCTGGTGGCGTCTTTCTCTGCCTATTGCAGATGAGCTGGAAGAGTCGCTCATTTGGAA GCTGACAGATCTGGGTCTCTGCCGACTTGCTGTTCAACATGCGCCTGAGAACTCTGAGCGCACTCTTTTGGCATGGTTGC CATCGTCTGAGTGGTCTGAGTCGGACAGAGATCAGCTGATGGCCAACCTGCGTCCTCTGGCCGAACCGTTTGGCCTGAAA TTAGCCAACCCCACTTGGTGCGAGGTGGCCGATGAAGACTGGAGTTTGAACTGGAAGCAAGATTGGCAACCCGATCCGGT GGGGCAGCGTTTGTTGATCTTGCCGGCTTGGTTGGATCTGCCGCAGGAGTATGCCGATCGGTTTGTTGTGCGACTAGACC CTGGCAGTGCTTTTGGCACTGGCAGCCACCCAAGCACTCGCCTTTGTCTGGAGGCGCTGGAAAGGAACCCACCGCTGGGC TTGAGGGTTGCAGATCTCGGCTGTGGCAGTGGGGTGTTGGGTTTCGCCGCACTTGCTTTTGGAGCTAGACAGGTGCTGGC CGCTGATACGGATTGCCAGGCTGTCTGCGCCTCTAGAGCTAATACAGAGCTCAATCAGCTCGATTTAGATCGTTTAAGGG TTGTGCATGGTTCTGTGGAGGCTTTGTCAGCGCAGCTAGAGGGACAGACCGTCGACCTGCTGCTCTGCAACATCCTGGCG CCTGTGATTGAGGTTTTGGCTCCAAGCTTTGATCAGTTGTTGAGTGCTAATGGTCGAGGTTTGCTCAGTGGTTTGCTGGT GAAGCAAGCGCCAAGGCTTCAGATGGTTTTGGAGGCGCTGGGATGGCGGGTGAATTGCCTGACTGAGCAGGGCTGCTGGG GGCTTTTAGATGTGTCTAAGCGGTAA
Upstream 100 bases:
>100_bases GCATTGATGATCCAATTCCGCCCAGCTTGCTGGTCACCATCCATGCGATCAATGGCATTAAGGAAGCCCATCCGGTCACC CTCTGATCAGGGCTGATGAG
Downstream 100 bases:
>100_bases TTCTGCGCAAATTTTTATATAAGCCAGAGTTATCAGTACTCGTTCTTTGATTGGCCTTGGCCGGGCAGATTGCACGATCA GACTGAATTTTTGCCGGGAG
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNFAAALRWWRLSLPIADELEESLIWKLTDLGLCRLAVQHAPENSERTLLAWLPSSEWSESDRDQLMANLRPLAEPFGLK LANPTWCEVADEDWSLNWKQDWQPDPVGQRLLILPAWLDLPQEYADRFVVRLDPGSAFGTGSHPSTRLCLEALERNPPLG LRVADLGCGSGVLGFAALAFGARQVLAADTDCQAVCASRANTELNQLDLDRLRVVHGSVEALSAQLEGQTVDLLLCNILA PVIEVLAPSFDQLLSANGRGLLSGLLVKQAPRLQMVLEALGWRVNCLTEQGCWGLLDVSKR
Sequences:
>Translated_301_residues MNFAAALRWWRLSLPIADELEESLIWKLTDLGLCRLAVQHAPENSERTLLAWLPSSEWSESDRDQLMANLRPLAEPFGLK LANPTWCEVADEDWSLNWKQDWQPDPVGQRLLILPAWLDLPQEYADRFVVRLDPGSAFGTGSHPSTRLCLEALERNPPLG LRVADLGCGSGVLGFAALAFGARQVLAADTDCQAVCASRANTELNQLDLDRLRVVHGSVEALSAQLEGQTVDLLLCNILA PVIEVLAPSFDQLLSANGRGLLSGLLVKQAPRLQMVLEALGWRVNCLTEQGCWGLLDVSKR >Mature_301_residues MNFAAALRWWRLSLPIADELEESLIWKLTDLGLCRLAVQHAPENSERTLLAWLPSSEWSESDRDQLMANLRPLAEPFGLK LANPTWCEVADEDWSLNWKQDWQPDPVGQRLLILPAWLDLPQEYADRFVVRLDPGSAFGTGSHPSTRLCLEALERNPPLG LRVADLGCGSGVLGFAALAFGARQVLAADTDCQAVCASRANTELNQLDLDRLRVVHGSVEALSAQLEGQTVDLLLCNILA PVIEVLAPSFDQLLSANGRGLLSGLLVKQAPRLQMVLEALGWRVNCLTEQGCWGLLDVSKR
Specific function: Methylates ribosomal protein L11
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family
Homologues:
Organism=Escherichia coli, GI2367208, Length=161, Percent_Identity=42.8571428571429, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PRMA_PROMM (Q7TUS7)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895257.1 - ProteinModelPortal: Q7TUS7 - SMR: Q7TUS7 - STRING: Q7TUS7 - GeneID: 1729432 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1430 - NMPDR: fig|74547.1.peg.1424 - eggNOG: COG2264 - HOGENOM: HBG584653 - OMA: MSFGTGY - ProtClustDB: PRK00517 - BioCyc: PMAR74547:PMT1430-MONOMER - GO: GO:0005737 - HAMAP: MF_00735 - InterPro: IPR010456 - InterPro: IPR004498 - TIGRFAMs: TIGR00406
Pfam domain/function: PF06325 PrmA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 33178; Mature: 33178
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFAAALRWWRLSLPIADELEESLIWKLTDLGLCRLAVQHAPENSERTLLAWLPSSEWSE CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC SDRDQLMANLRPLAEPFGLKLANPTWCEVADEDWSLNWKQDWQPDPVGQRLLILPAWLDL CHHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHCC PQEYADRFVVRLDPGSAFGTGSHPSTRLCLEALERNPPLGLRVADLGCGSGVLGFAALAF CHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH GARQVLAADTDCQAVCASRANTELNQLDLDRLRVVHGSVEALSAQLEGQTVDLLLCNILA HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHH PVIEVLAPSFDQLLSANGRGLLSGLLVKQAPRLQMVLEALGWRVNCLTEQGCWGLLDVSK HHHHHHCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCEECEECCC R C >Mature Secondary Structure MNFAAALRWWRLSLPIADELEESLIWKLTDLGLCRLAVQHAPENSERTLLAWLPSSEWSE CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC SDRDQLMANLRPLAEPFGLKLANPTWCEVADEDWSLNWKQDWQPDPVGQRLLILPAWLDL CHHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHCC PQEYADRFVVRLDPGSAFGTGSHPSTRLCLEALERNPPLGLRVADLGCGSGVLGFAALAF CHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH GARQVLAADTDCQAVCASRANTELNQLDLDRLRVVHGSVEALSAQLEGQTVDLLLCNILA HHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHH PVIEVLAPSFDQLLSANGRGLLSGLLVKQAPRLQMVLEALGWRVNCLTEQGCWGLLDVSK HHHHHHCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCEECEECCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642