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The map label for this gene is ydiU [C]

Identifier: 33863659

GI number: 33863659

Start: 1477097

End: 1478800

Strand: Direct

Name: ydiU [C]

Synonym: PMT1392

Alternate gene names: 33863659

Gene position: 1477097-1478800 (Clockwise)

Preceding gene: 33863657

Following gene: 33863664

Centisome position: 61.27

GC content: 43.13

Gene sequence:

>1704_bases
ATGTCGCATCCATCTGAATCATCTGCTGCTCCCTGCGTAACGACAGTCGATGAGTTTGCAAAGCTGGCGGATTATTCTCT
GATGGATAGCTTAAATACTGACCCTGATTCCACGGTAGATGGTGATGATCACCTTGCCCGACAAGTTTTTTCGGGTCATT
TCGTACCTGTAACACCCACGCCGCTTAAAAACCCAGAATATGTAACTCATAGCAGCACATTTTTTAATGAACTTGGCTTG
AACAACGAGCTGGCATTTAATGAAAATTTTTGCAAGTTATTTTCAGGGGATCTCTCTGCTACGCGTGAGCCTATGCGACA
GGTTGGCTGGGCAACTGGTTATGCACTATCTATTTATGGCAGAGAATACACCCAACAATGTCCATTTGGCACTGGTAATG
GATATGGCGATGGCCGAGCGATATCTGTATTTGAAGGAATCATTAATGGCAAACGCTGGGAAATGCAATTAAAAGGTGGT
GGTCCAACGCCTTACTGCCGTGGTGCCGACGGACGCGCAGTACTACGTTCAAGTGTGCGTGAATTTCTAGCGCAAGAATA
TATGCAGGCTTTAGGTGTTCCAACATCGCGTTCGTTAACACTCTATGTTTCTAAATCTGAGACAATCACCCGCCCTTGGT
ATTCTCAACACTCTCAATCCACCGACCCTGATATTTTGGTGGAGAATCCTGTAGCAATTTCAACTCGCGTCGCACCATCC
TTTTTGCGAGTTGGTCAACTAGAATTATTTGCGCGTCGCGCTCGCAGCAATACTCATCCAAGAGCATTAGAAGAGTTGCG
CATGATTGTGTCGCATTTAATTGAACGAGAGTACAAAAGTGACATTAATCAAACCCTTTCTTTTACAGTTCAATTGGTGA
AGTTGGCGCGGCTATTTCGTGATCGCCTTACTTTATTGGTAGCAAATTGGCTCCGCATTGGCTACTGCCAAGGCAATTTC
AACAGTGACAATTGCGCCGCGGGTGGCTTCACCCTCGACTATGGACCATTTGGATTTTGTGAAATCTTTGATCCTAAATT
TCAGCCTTGGACTGGCGGCGGCAAACACTTTTCATACTTCAATCAACCAATCGCGGCGGAAGCAAATTATCATATGTTTT
GGAAAGCTTTAAGGCCGCTACTCGAAGAAGATGCTAAAGCCCTAAAAGAGTTTGACCAAGTTCGTGATGGCTTTGAACAA
GCCATGGATAAACAAATCCAAAAAATGTGGGCAGCCAAGCTTGGCTTGAAAGAATACAACTCCAATCTATTTGAGGAATT
ATTGCAATTAATTATCAATTCAAAAGTGGATTACACGATCTTCTTTCGCGAGCTATCTCATATACCAAATAATTTATCAG
CATTAAAAAAGAGCTTCTACATCCAAACTTCACAACAAATCGATGAGCAATGGAAATCTTGGCTGCAAAGCTGGCGCGAC
CTCGTGCTTAACAAAGGAAGTTCAACGGAGACATCAAAAACCATGAAACTGACTAATCCAAAATATACTTGGCGAGAGTG
GTTAATTGCCCCTGCTTATCAGCAAGCCGAAGAGGGCAACTATTCCTTAGTGAAAGAGCTGCAAGAAGTGCTAAGCCATC
CTTATGATGAGCAATCAAAAGAAATAGAAGATAAATATTATCGCCTAAAGCCTAAGGTATTCTTTAATGCTGGTGGCATA
TCGCACTATAGCTGTTCATCTTGA

Upstream 100 bases:

>100_bases
ACACTATAGAAGTTCCTTAGACTCAACGTTTTGCTTATACGCTGGTGTTCAAAACACATAGAGGACTGTTGCCGGACCTC
CTAAGTCACTTTTAACAAGA

Downstream 100 bases:

>100_bases
GGCCAAATACAAACTGAACCATTGGAATAATAAATATTAGCCAAAAAGCTTTATTCATTAACTCACAAAAGGCAGTGACT
TCATTATCAGTGCGCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSHPSESSAAPCVTTVDEFAKLADYSLMDSLNTDPDSTVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGL
NNELAFNENFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSTDPDILVENPVAISTRVAPS
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKSDINQTLSFTVQLVKLARLFRDRLTLLVANWLRIGYCQGNF
NSDNCAAGGFTLDYGPFGFCEIFDPKFQPWTGGGKHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQ
AMDKQIQKMWAAKLGLKEYNSNLFEELLQLIINSKVDYTIFFRELSHIPNNLSALKKSFYIQTSQQIDEQWKSWLQSWRD
LVLNKGSSTETSKTMKLTNPKYTWREWLIAPAYQQAEEGNYSLVKELQEVLSHPYDEQSKEIEDKYYRLKPKVFFNAGGI
SHYSCSS

Sequences:

>Translated_567_residues
MSHPSESSAAPCVTTVDEFAKLADYSLMDSLNTDPDSTVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGL
NNELAFNENFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGG
GPTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSTDPDILVENPVAISTRVAPS
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKSDINQTLSFTVQLVKLARLFRDRLTLLVANWLRIGYCQGNF
NSDNCAAGGFTLDYGPFGFCEIFDPKFQPWTGGGKHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQ
AMDKQIQKMWAAKLGLKEYNSNLFEELLQLIINSKVDYTIFFRELSHIPNNLSALKKSFYIQTSQQIDEQWKSWLQSWRD
LVLNKGSSTETSKTMKLTNPKYTWREWLIAPAYQQAEEGNYSLVKELQEVLSHPYDEQSKEIEDKYYRLKPKVFFNAGGI
SHYSCSS
>Mature_566_residues
SHPSESSAAPCVTTVDEFAKLADYSLMDSLNTDPDSTVDGDDHLARQVFSGHFVPVTPTPLKNPEYVTHSSTFFNELGLN
NELAFNENFCKLFSGDLSATREPMRQVGWATGYALSIYGREYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGG
PTPYCRGADGRAVLRSSVREFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSTDPDILVENPVAISTRVAPSF
LRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKSDINQTLSFTVQLVKLARLFRDRLTLLVANWLRIGYCQGNFN
SDNCAAGGFTLDYGPFGFCEIFDPKFQPWTGGGKHFSYFNQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQA
MDKQIQKMWAAKLGLKEYNSNLFEELLQLIINSKVDYTIFFRELSHIPNNLSALKKSFYIQTSQQIDEQWKSWLQSWRDL
VLNKGSSTETSKTMKLTNPKYTWREWLIAPAYQQAEEGNYSLVKELQEVLSHPYDEQSKEIEDKYYRLKPKVFFNAGGIS
HYSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=425, Percent_Identity=31.2941176470588, Blast_Score=149, Evalue=6e-36,
Organism=Escherichia coli, GI1787999, Length=526, Percent_Identity=30.2281368821293, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6325034, Length=488, Percent_Identity=26.4344262295082, Blast_Score=133, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 64606; Mature: 64475

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPSESSAAPCVTTVDEFAKLADYSLMDSLNTDPDSTVDGDDHLARQVFSGHFVPVTPT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCC
PLKNPEYVTHSSTFFNELGLNNELAFNENFCKLFSGDLSATREPMRQVGWATGYALSIYG
CCCCCCEEECCHHHHHHHCCCCCEECCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEECC
REYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGGPTPYCRGADGRAVLRSSVR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
EFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSTDPDILVENPVAISTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCEEECCCCEEEHHHCHH
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKSDINQTLSFTVQLVKLARLFR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLTLLVANWLRIGYCQGNFNSDNCAAGGFTLDYGPFGFCEIFDPKFQPWTGGGKHFSYF
HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCHHHC
NQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQAMDKQIQKMWAAKLGLKEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLFEELLQLIINSKVDYTIFFRELSHIPNNLSALKKSFYIQTSQQIDEQWKSWLQSWRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLNKGSSTETSKTMKLTNPKYTWREWLIAPAYQQAEEGNYSLVKELQEVLSHPYDEQSK
HHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHH
EIEDKYYRLKPKVFFNAGGISHYSCSS
HHHHHHHEECCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SHPSESSAAPCVTTVDEFAKLADYSLMDSLNTDPDSTVDGDDHLARQVFSGHFVPVTPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCC
PLKNPEYVTHSSTFFNELGLNNELAFNENFCKLFSGDLSATREPMRQVGWATGYALSIYG
CCCCCCEEECCHHHHHHHCCCCCEECCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEECC
REYTQQCPFGTGNGYGDGRAISVFEGIINGKRWEMQLKGGGPTPYCRGADGRAVLRSSVR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH
EFLAQEYMQALGVPTSRSLTLYVSKSETITRPWYSQHSQSTDPDILVENPVAISTRVAPS
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCEEECCCCEEEHHHCHH
FLRVGQLELFARRARSNTHPRALEELRMIVSHLIEREYKSDINQTLSFTVQLVKLARLFR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLTLLVANWLRIGYCQGNFNSDNCAAGGFTLDYGPFGFCEIFDPKFQPWTGGGKHFSYF
HHHHHHHHHHHHEEEEECCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCHHHC
NQPIAAEANYHMFWKALRPLLEEDAKALKEFDQVRDGFEQAMDKQIQKMWAAKLGLKEYN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNLFEELLQLIINSKVDYTIFFRELSHIPNNLSALKKSFYIQTSQQIDEQWKSWLQSWRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLNKGSSTETSKTMKLTNPKYTWREWLIAPAYQQAEEGNYSLVKELQEVLSHPYDEQSK
HHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHH
EIEDKYYRLKPKVFFNAGGISHYSCSS
HHHHHHHEECCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA