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The map label for this gene is yebA [H]

Identifier: 33863625

GI number: 33863625

Start: 1444331

End: 1445302

Strand: Reverse

Name: yebA [H]

Synonym: PMT1358

Alternate gene names: 33863625

Gene position: 1445302-1444331 (Counterclockwise)

Preceding gene: 33863626

Following gene: 33863620

Centisome position: 59.95

GC content: 57.72

Gene sequence:

>972_bases
GTGCCGTTTCGCTGGTTCGCTGCTGCATGGCTGCTTTCAGTGCCTGTCCTTGCCAAGCCAATGGATCCTGTTGCTCAAGC
GGTTCGGCAAGCACCGTTGTTGCCTGCGCGTGAGGCTAGTCAGCTTGAGCGGCCGCAAAGGTTTGATCAATCTCTTGAAG
AGCTGGAGCGCAACAAGGTGATCACTTCAGCGGAACGCCGACAGTTGGAGGGGCATGCGGTGGGTTTGACGATCGATGTG
CCTCGGATGCAGCAGGCCTGTCGGAGTGGTGCTCTGTCAGCCAAGGAATGTGCCAGTGGCGTTGCTCTGCGGTCTAGGGG
CCGTCGAGGTCGTTCCCAGTTCAGCTTGCTGCGCCGTGGCCCTGGCGGTCGGCCATTGCCGCCGCTTACGGTTCCGGTTT
CGGCATTGTTGGCAGGCTCTGGGAGTGGCTTCAGCTTGGCTTCAGTGTTTGCGGTGACTCCGAGGCCCAAGCCTCTGCAA
GGGAATGGAGATCGTCAGCTTCTTTTCCCGATCATTGGTGGGGCTTTTACCAGTAGTGAATTCGGCATGCGTTTGCATCC
TGTGATTGGCCATTGGTTGATGCATGCGGGTAAAGACCTAGCCGCACCAGAAGGTGCTCCGGTGGTGGCTGCATTAACGG
GAACTGTTGTCAGTAGCGGCCTAGCTGGGGGCTATGGCATTGCTGTTGAACTGGAACATGATGCTCCTCGCAGGCGCACG
CTTTATGGGCACCTTTCAGAGATTTATCTGCGGCCGGGTCAGCGGGTTCGTCAAGGGGAGGTGATTGGTCGGGTTGGTAG
TACCGGCTTAAGCACTGGACCACATCTCCATTTCGAATTGAGACGCCCTCAGGGTGGCGGTTGGGTTGCGATGGATCCCG
GTGAGTTGGATCTCAATCCACTCATTGCTTCAGGTGTCGACCCTGTTTCGCTGTTGGTCGGTCAGTTGATCGAGAGCCTC
GAACGGCCTTAA

Upstream 100 bases:

>100_bases
CGCTTTTGCTGAGCCAGGGTTCTCGGACCATGCGCTGGACACGTTGGTGATAACTGAATTGGATTTTTCTATAGTTTTTC
TCGTCTGAGGATCCGATCGG

Downstream 100 bases:

>100_bases
TCAATTAACACCTTGCTTCGTGAAGGAAAAAAGAAATCTTTTGATCTCTCCCGATGGAAGAATTTTGAGTATTGAGAATG
CAATTTGGGCAAAACCAAAC

Product: M23/M37 familypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQAPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDV
PRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRPLPPLTVPVSALLAGSGSGFSLASVFAVTPRPKPLQ
GNGDRQLLFPIIGGAFTSSEFGMRLHPVIGHWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLIASGVDPVSLLVGQLIESL
ERP

Sequences:

>Translated_323_residues
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQAPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDV
PRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRPLPPLTVPVSALLAGSGSGFSLASVFAVTPRPKPLQ
GNGDRQLLFPIIGGAFTSSEFGMRLHPVIGHWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLIASGVDPVSLLVGQLIESL
ERP
>Mature_322_residues
PFRWFAAAWLLSVPVLAKPMDPVAQAVRQAPLLPAREASQLERPQRFDQSLEELERNKVITSAERRQLEGHAVGLTIDVP
RMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRGPGGRPLPPLTVPVSALLAGSGSGFSLASVFAVTPRPKPLQG
NGDRQLLFPIIGGAFTSSEFGMRLHPVIGHWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRTL
YGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNPLIASGVDPVSLLVGQLIESLE
RP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=139, Percent_Identity=37.410071942446, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34521; Mature: 34390

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFRWFAAAWLLSVPVLAKPMDPVAQAVRQAPLLPAREASQLERPQRFDQSLEELERNKV
CCCHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ITSAERRQLEGHAVGLTIDVPRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRG
HHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
PGGRPLPPLTVPVSALLAGSGSGFSLASVFAVTPRPKPLQGNGDRQLLFPIIGGAFTSSE
CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
FGMRLHPVIGHWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
CCCEEHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCCHHH
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCH
LIASGVDPVSLLVGQLIESLERP
HHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFRWFAAAWLLSVPVLAKPMDPVAQAVRQAPLLPAREASQLERPQRFDQSLEELERNKV
CCHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ITSAERRQLEGHAVGLTIDVPRMQQACRSGALSAKECASGVALRSRGRRGRSQFSLLRRG
HHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
PGGRPLPPLTVPVSALLAGSGSGFSLASVFAVTPRPKPLQGNGDRQLLFPIIGGAFTSSE
CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC
FGMRLHPVIGHWLMHAGKDLAAPEGAPVVAALTGTVVSSGLAGGYGIAVELEHDAPRRRT
CCCEEHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEECCCCCCHHH
LYGHLSEIYLRPGQRVRQGEVIGRVGSTGLSTGPHLHFELRRPQGGGWVAMDPGELDLNP
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCH
LIASGVDPVSLLVGQLIESLERP
HHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]