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The map label for this gene is ykoG [H]

Identifier: 33863624

GI number: 33863624

Start: 1442488

End: 1443210

Strand: Direct

Name: ykoG [H]

Synonym: PMT1357

Alternate gene names: 33863624

Gene position: 1442488-1443210 (Clockwise)

Preceding gene: 33863623

Following gene: 33863629

Centisome position: 59.83

GC content: 47.86

Gene sequence:

>723_bases
ATGACTAACGCATCATCACCGAGAACCAGAGTCCTATTGGTGGATGATGAACCGAGGCTGACAGAACTTCTACGCCTAGA
GCTTGATGTTGAGGGTTATGAGGTCAGCGTGGCGGAGGACGGCGCCTCAGGGTTGATCAAAGCTCGCAGTGATCCATCAC
CAAACCTCATCATTCTTGATTGGAACCTTCCCGATTTCACAGGTGTCGATATCTGTCAACGTATTCGTTCTAGTGGCATT
AAGACACCGATCTTGATGCTCACAGGTCATGACGATGTCACCGATCGCGTCAAGGCTCTGGATGCTGGAGTTGATGACTA
TCTAACCAAACCCTTCTCCATTGAAGAGCTCATGGCCAGATTACGAGCCATGCAACGCAGAGCAGAGCAATTCTCAGGAG
GCTCTGGCATCGAGCATCAACCAGAGACCATACAAGTGGCGGACTTAAAGATGAACACCAGCACCAGGGATGTAACGCGC
GACAATCGCACGATTCAACTTTCCGTAAAAGAATATGAGTTACTATATTTTCTGATGAATGGCGCAGGAAAAGTTCACGA
ACGTGACGCCATTATGAAAGCTGTATGGGGAGAGGACTTCTTCGGAGATGACAATCTTCTAGACGTTTACATCCGCTATC
TGCGCCAAAAGATTGAACAAAAAGGTACTGCTACTTTGATTCACACAGTTCGCGGGGTTGGCTTCATCCTTCGAGAAGAA
TAA

Upstream 100 bases:

>100_bases
TGGATCCACACCCTGAAGGAGGGGCCCACGAATAACCATTGATTGCACAAGGTCTGGATCCAGACAAACTGCTTAAGTAG
GCACCAGGTTGATTGCATGA

Downstream 100 bases:

>100_bases
TACATGCAAATTGCCTTCAGCTTTTATAATGAAAATATCTTAAGCCATATTTTTACGAAGAAGGACTTCATTTCCTCAGT
GCCTTTTCACAAAGACCTTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTNASSPRTRVLLVDDEPRLTELLRLELDVEGYEVSVAEDGASGLIKARSDPSPNLIILDWNLPDFTGVDICQRIRSSGI
KTPILMLTGHDDVTDRVKALDAGVDDYLTKPFSIEELMARLRAMQRRAEQFSGGSGIEHQPETIQVADLKMNTSTRDVTR
DNRTIQLSVKEYELLYFLMNGAGKVHERDAIMKAVWGEDFFGDDNLLDVYIRYLRQKIEQKGTATLIHTVRGVGFILREE

Sequences:

>Translated_240_residues
MTNASSPRTRVLLVDDEPRLTELLRLELDVEGYEVSVAEDGASGLIKARSDPSPNLIILDWNLPDFTGVDICQRIRSSGI
KTPILMLTGHDDVTDRVKALDAGVDDYLTKPFSIEELMARLRAMQRRAEQFSGGSGIEHQPETIQVADLKMNTSTRDVTR
DNRTIQLSVKEYELLYFLMNGAGKVHERDAIMKAVWGEDFFGDDNLLDVYIRYLRQKIEQKGTATLIHTVRGVGFILREE
>Mature_239_residues
TNASSPRTRVLLVDDEPRLTELLRLELDVEGYEVSVAEDGASGLIKARSDPSPNLIILDWNLPDFTGVDICQRIRSSGIK
TPILMLTGHDDVTDRVKALDAGVDDYLTKPFSIEELMARLRAMQRRAEQFSGGSGIEHQPETIQVADLKMNTSTRDVTRD
NRTIQLSVKEYELLYFLMNGAGKVHERDAIMKAVWGEDFFGDDNLLDVYIRYLRQKIEQKGTATLIHTVRGVGFILREE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=226, Percent_Identity=38.4955752212389, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=40.7894736842105, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=32.8947368421053, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786911, Length=212, Percent_Identity=35.377358490566, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=33.1896551724138, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=33.0434782608696, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=35.9307359307359, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789402, Length=231, Percent_Identity=30.7359307359307, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=31.5789473684211, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=30.3964757709251, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=28.6343612334802, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI145693140, Length=190, Percent_Identity=33.1578947368421, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788550, Length=165, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790299, Length=159, Percent_Identity=27.0440251572327, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788521, Length=126, Percent_Identity=34.9206349206349, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27098; Mature: 26967

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNASSPRTRVLLVDDEPRLTELLRLELDVEGYEVSVAEDGASGLIKARSDPSPNLIILD
CCCCCCCCEEEEEECCCCHHHHHHHHEECCCCEEEEEECCCCCCEEEECCCCCCCEEEEE
WNLPDFTGVDICQRIRSSGIKTPILMLTGHDDVTDRVKALDAGVDDYLTKPFSIEELMAR
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHH
LRAMQRRAEQFSGGSGIEHQPETIQVADLKMNTSTRDVTRDNRTIQLSVKEYELLYFLMN
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEHHEEEEEEEEC
GAGKVHERDAIMKAVWGEDFFGDDNLLDVYIRYLRQKIEQKGTATLIHTVRGVGFILREE
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECC
>Mature Secondary Structure 
TNASSPRTRVLLVDDEPRLTELLRLELDVEGYEVSVAEDGASGLIKARSDPSPNLIILD
CCCCCCCEEEEEECCCCHHHHHHHHEECCCCEEEEEECCCCCCEEEECCCCCCCEEEEE
WNLPDFTGVDICQRIRSSGIKTPILMLTGHDDVTDRVKALDAGVDDYLTKPFSIEELMAR
CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHH
LRAMQRRAEQFSGGSGIEHQPETIQVADLKMNTSTRDVTRDNRTIQLSVKEYELLYFLMN
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEHHEEEEEEEEC
GAGKVHERDAIMKAVWGEDFFGDDNLLDVYIRYLRQKIEQKGTATLIHTVRGVGFILREE
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]