| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863619
Identifier: 33863619
GI number: 33863619
Start: 1436383
End: 1436859
Strand: Reverse
Name: 33863619
Synonym: PMT1352
Alternate gene names: NA
Gene position: 1436859-1436383 (Counterclockwise)
Preceding gene: 33863620
Following gene: 33863618
Centisome position: 59.6
GC content: 53.25
Gene sequence:
>477_bases ATGCTCAAGGTGAGTGCAAGGGGCTTAATTGCTGATGGGTTAAGCCTGTGTGTTCCGCTGCTTATGTTGATGTTGCAGTC CTGTGCCAATACGCCGTTTGGTCAGGAACTTGCGAACAGTTTTGATGCTCCCACGCAGGAGCCTGTGCCTGTCGCACCTG TTTCCAGTGATCCAGAACCCACGAACTCTTTATCTGACTCAAGAGTTCCTGATCAGGACGTGAGCAACCCGGAAGCTGCT AATCCTCAGACATCGAGACAGGTTGAGCAGAAGCCAGAGTTGGCTAGTAACCCTGTTATCCCGCAGCCTTATCGCATCAC CATCAAGTTGTCTGGTGCCGATCCATCGGCGCCGGCAGAAGCCGTCACTCAGGCCTTACGAATGGCTGGAGTGACTTTTG AGGTTGAGACGATTGAACGGGTCAAGGATCAGTCTTTGATCAGAGTGCCGCCTTCCGGTATGGGAGCCCAGCCTTGA
Upstream 100 bases:
>100_bases CCGCCGCAAGTAAACCAAAAACTCGTAAACCTCCTGCTACTACAAAGACAGGTCGGTTGCGAGCCAGTGCTGTTCGGGTC ATCAAGCCTGGTGAGGTTTG
Downstream 100 bases:
>100_bases TCTGGTTTGGTGGCTTGCGCAAGGGTTCGAGAGCTTCTCAACCCATAAGCCGTCGCCAGGCCCTGAGAATGATGGAGACT TCTTACCTTGCGGCTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MLKVSARGLIADGLSLCVPLLMLMLQSCANTPFGQELANSFDAPTQEPVPVAPVSSDPEPTNSLSDSRVPDQDVSNPEAA NPQTSRQVEQKPELASNPVIPQPYRITIKLSGADPSAPAEAVTQALRMAGVTFEVETIERVKDQSLIRVPPSGMGAQP
Sequences:
>Translated_158_residues MLKVSARGLIADGLSLCVPLLMLMLQSCANTPFGQELANSFDAPTQEPVPVAPVSSDPEPTNSLSDSRVPDQDVSNPEAA NPQTSRQVEQKPELASNPVIPQPYRITIKLSGADPSAPAEAVTQALRMAGVTFEVETIERVKDQSLIRVPPSGMGAQP >Mature_158_residues MLKVSARGLIADGLSLCVPLLMLMLQSCANTPFGQELANSFDAPTQEPVPVAPVSSDPEPTNSLSDSRVPDQDVSNPEAA NPQTSRQVEQKPELASNPVIPQPYRITIKLSGADPSAPAEAVTQALRMAGVTFEVETIERVKDQSLIRVPPSGMGAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16729; Mature: 16729
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVSARGLIADGLSLCVPLLMLMLQSCANTPFGQELANSFDAPTQEPVPVAPVSSDPEP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC TNSLSDSRVPDQDVSNPEAANPQTSRQVEQKPELASNPVIPQPYRITIKLSGADPSAPAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHH AVTQALRMAGVTFEVETIERVKDQSLIRVPPSGMGAQP HHHHHHHHHCCCEEHHHHHHHHCCCEEECCCCCCCCCC >Mature Secondary Structure MLKVSARGLIADGLSLCVPLLMLMLQSCANTPFGQELANSFDAPTQEPVPVAPVSSDPEP CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC TNSLSDSRVPDQDVSNPEAANPQTSRQVEQKPELASNPVIPQPYRITIKLSGADPSAPAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHH AVTQALRMAGVTFEVETIERVKDQSLIRVPPSGMGAQP HHHHHHHHHCCCEEHHHHHHHHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA