| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863618
Identifier: 33863618
GI number: 33863618
Start: 1435706
End: 1436386
Strand: Reverse
Name: 33863618
Synonym: PMT1351
Alternate gene names: NA
Gene position: 1436386-1435706 (Counterclockwise)
Preceding gene: 33863619
Following gene: 33863617
Centisome position: 59.58
GC content: 55.8
Gene sequence:
>681_bases TTGATCTGGTTTGGTGGCTTGCGCAAGGGTTCGAGAGCTTCTCAACCCATAAGCCGTCGCCAGGCCCTGAGAATGATGGA GACTTCTTACCTTGCGGCTGCTTCAGCTCTGATCTGGGTGGCGCTCTATTACCTCCCTGTTGGTGGAGCCCTATTTCGGC TGGCGTTGCCGTTGCCTTTAGCCCTGCTGCATGTGCGTCGCGGTTCTAAGGCAGGGCTAGAGGGCGTTGCCCTGGCGGTG CTTTTGTTGATTGCCTTGATGGGGCCTGTTCGTGGTCCCTTGGTGCTTTTCCCTTATGGCTTTCTAGCGCTCTGGCTTGG CTGGAGTTGGCATCGTGGGCTGAGCTGGTGGGTGAGTTGGGGGTGTGGAGTTGTGATTGGAACAGCGGGTTTTCTGGTAA GGGTTGTGGTGTTGTCGCTTTTGGTGGGTGAGAACCTTTGGGTGGTGATCACCCGAGCAGGATCAGGTCTGCTTGATCGA TTGGTGGACCTGCTCAATCTCCCTCTGGCGCCAGATCTCAATAATGTGCAGCTGATGGCTTTTGCTTTGGTGGTTTTTCA AGAGTTGGTCTACGTGCTTGTTCTTCATGCGCTGGCCTTCTGGATTTTTCCTCGGCTGCAGGGCGCAATTCCCGAGCCCC CCAGACTTCTGCATGGCCTCGTTGCCCTGTATCCCCTCTAA
Upstream 100 bases:
>100_bases CCTTACGAATGGCTGGAGTGACTTTTGAGGTTGAGACGATTGAACGGGTCAAGGATCAGTCTTTGATCAGAGTGCCGCCT TCCGGTATGGGAGCCCAGCC
Downstream 100 bases:
>100_bases TTTCAAGCCGGGTTCGCCTCCAAGAGGTCTACCTTTAGCTTGTAAAGCCTTTGGTGCAGGTGCATCTCTAGCCGCGCAGG AGAGATGGTTAATGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MIWFGGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGFLALWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNNVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGAIPEPPRLLHGLVALYPL
Sequences:
>Translated_226_residues MIWFGGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGFLALWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNNVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGAIPEPPRLLHGLVALYPL >Mature_226_residues MIWFGGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPLALLHVRRGSKAGLEGVALAV LLLIALMGPVRGPLVLFPYGFLALWLGWSWHRGLSWWVSWGCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDR LVDLLNLPLAPDLNNVQLMAFALVVFQELVYVLVLHALAFWIFPRLQGAIPEPPRLLHGLVALYPL
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24802; Mature: 24802
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWFGGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPL CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLHVRRGSKAGLEGVALAVLLLIALMGPVRGPLVLFPYGFLALWLGWSWHRGLSWWVSW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH GCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDRLVDLLNLPLAPDLNNVQLMA CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHH FALVVFQELVYVLVLHALAFWIFPRLQGAIPEPPRLLHGLVALYPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIWFGGLRKGSRASQPISRRQALRMMETSYLAAASALIWVALYYLPVGGALFRLALPLPL CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH ALLHVRRGSKAGLEGVALAVLLLIALMGPVRGPLVLFPYGFLALWLGWSWHRGLSWWVSW HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH GCGVVIGTAGFLVRVVVLSLLVGENLWVVITRAGSGLLDRLVDLLNLPLAPDLNNVQLMA CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHH FALVVFQELVYVLVLHALAFWIFPRLQGAIPEPPRLLHGLVALYPL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA