Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is yloA [H]

Identifier: 33863586

GI number: 33863586

Start: 1403994

End: 1405838

Strand: Direct

Name: yloA [H]

Synonym: PMT1319

Alternate gene names: 33863586

Gene position: 1403994-1405838 (Clockwise)

Preceding gene: 33863585

Following gene: 33863587

Centisome position: 58.24

GC content: 55.77

Gene sequence:

>1845_bases
TTGCCAACGCCACTGGGCCCAGTAATCACCGTGAGCTTTCCTTCAGCGGCGGATGAAGCCATTGATTGCATTGAATCGGA
TCGCAGAGTAGGAAGGCTGCGTGCAATCCAGGTCCCGACTGAATCGATGGCCCATGCTGCCCTCCAGGTCATGGACCTCT
CAAGCTTGCGCGCTGTACTGAGCGAGCTCCGCAAGGAGGTGCTGCCAAGCCGCTTCGAAAAGGTCCAACAACCAGAACCT
CATACCCTCCAACTGGGGCTGCGCACACTCAAAGGTCTTGTGTGGCTGGAACTCAGTTGGCGTGCTGATTGTCCCCGACT
GGTCAAGATCACCCCTCCTCCCCGCCTAGGCAGCGGCAGCACTTTGGCCCAGCAGATTCAACATGGCCTTCGACAGATGG
CCCTCATTGAACTGAAACAGAAAGGATTTGATCGCGTGGTGGAGTGCGGCCTCGCCCACCGCCCCGGCGAACCTATCGAG
CGCACTCTTGTGCTGGAACTGATGGGACGCCACAGCAACCTGCTTCTGCTTGATCGTCAACGCCAGGTGATCACCCTTGG
ACGCCAGGTACGCAACCATCAATCAAGAGTGAGACCAATCGGAACTGCAGACATCTATGTAGCTCCACCACCGATGCAAG
GCAGAGAACCAAGCTCAAAGGAATCCCTAAAACGCTGGAAAGACATTCTCTGCCTTGTGCCAACCAAGCTACGTAGCGCT
CTGCAGCAGTGTTACCAAGGCATCAGTCCTGCACTAGCTTTGCAGCTGGTTGACGACGATGCAAAAAAAGCACATGCCCT
GCTGGAGGTTTCAGTACTTGAGATCACCGACGAGCAATGGCAACACCTTTACCACCGCTGGAGTCGATGGCTGGACTGTC
TTGAGAAAGAGCGCTTCACGATGAGGTTTGACGGTCCAAGCAGCTACCGCGTCTGGGACTGTGACACCTCAACCTCCTCC
TCCTTCACCGATGGGCTCAGCCTCACTCTCGGGAGTTATTACCGAAGGCATCTTGAAACCCAATCTCTCAATCAACTAGC
CGAAGACCTCCAGAAAAGACTTTTTCAGTGGCGACAACGAGAGGAGCAGGCCCTTGGCGAACAACAGGGTCGACTCAACG
AAACCAGTCAAAGCAATTCTCTTCAACAACAAGCCGACGCCATGCTTTGCCTGCCTTCGCCGAGCAAGGATCTGATCAAC
CAAACCCAAAAGCTCTACCGAAAAGCTCAAAAATTCCGCCGCTCAGTGCCCGTGCTGAAAACACGGATTGAACATCACCA
GCAAAGGCTGCAGCTGATCCAAGGCAGTGAAATGTTTCTGGAAGATCTGCTTGGAACCAGCTGGGAAGGACAGCGAGAAC
GGTCGATAAGGCTGCAGGAGTTGCGGCAGGAGCTGGACGAGTTGCTGATCTCTCAATCCCGCAATCGCCAGAAGCGAGGC
CGTCGCAATCAACAACCCCCAAGCCCCCTCGAACTGACCACTCCTGGTGGACTCATCGTTCAGGTTGGTCGCAACCACCG
CCAAAACGATTGGATCAGCCTTCGCCAAGCTCGCCCTGGTGATCTTTGGTTTCATGCCCAGGAATGTCCAGGCAGCCATG
TCGTTCTCAAGGCCTCCAATGGCCATGCTGAGGAGGCCGACCTGCAACTAGCTGCAGACCTGGCCGCTCACTTCAGTCGT
GCTAGAGGCAATCAACGCGTACCCGTGGTGATGGTGCCCACAAGCAACCTGCAGCGAATCCCAGGAGCAGGCCCAGGGAC
CGTGCGATACCGGGACGGAAACCTTTGCTGGGCTGAACCAGACCGAGGGCTTCAACACCTCTCTGCCTCAGAACTCTTAG
TCTGA

Upstream 100 bases:

>100_bases
ATCGCCCTCAATCTCGCCTTGCCTGGCTTCACGCGTTGTCGCCGAAATAGACAGCCAGATCTCTGGATGGAGCTCTAGGA
GTTGCTTCACTAACGAACCC

Downstream 100 bases:

>100_bases
TGAAAACCAAGCGGCGCCTGTTCTGACCAGTCCCGATCAGCCCACAGGTTCGGTTCTTCCACCCCCTACCCCGATTCACG
TCGAGCAGGGAATCAAGCAC

Product: secreted protein MPB70 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEP
HTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIE
RTLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA
LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSS
SFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLIN
QTQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG
RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSR
ARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV

Sequences:

>Translated_614_residues
MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEP
HTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIE
RTLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA
LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSS
SFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLIN
QTQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG
RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSR
ARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV
>Mature_613_residues
PTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEPH
TLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIER
TLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSAL
QQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSSS
FTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQ
TQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRGR
RNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSRA
RGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 69894; Mature: 69763

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
SELRKEVLPSRFEKVQQPEPHTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCCCH
TLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIERTLVLELMGRHSNLLLLDRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
RQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFT
HHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE
MRFDGPSSYRVWDCDTSTSSSFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQR
EEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQTQKLYRKAQKFRRSVPVLK
HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
TRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASN
CCCCCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEECCC
GHAEEADLQLAADLAAHFSRARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCC
DRGLQHLSASELLV
CHHHHHCCHHHCCC
>Mature Secondary Structure 
PTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVL
CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
SELRKEVLPSRFEKVQQPEPHTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCCCH
TLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIERTLVLELMGRHSNLLLLDRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
RQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH
LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFT
HHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE
MRFDGPSSYRVWDCDTSTSSSFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQR
EEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQTQKLYRKAQKFRRSVPVLK
HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
TRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC
RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASN
CCCCCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEECCC
GHAEEADLQLAADLAAHFSRARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCC
DRGLQHLSASELLV
CHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]