| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is rrmA [C]
Identifier: 33863510
GI number: 33863510
Start: 1330456
End: 1331085
Strand: Direct
Name: rrmA [C]
Synonym: PMT1242
Alternate gene names: 33863510
Gene position: 1330456-1331085 (Clockwise)
Preceding gene: 33863509
Following gene: 33863511
Centisome position: 55.19
GC content: 52.06
Gene sequence:
>630_bases ATGACCTCACCACTAAGAACCTTTGCCTACGAGCATCGCTGGTTTTATGACCTAGTGACAACCATTTCGGCCCTCAGCGT AGGGGGTGTAAAGCGGTTGAGGTCCTTAGGGCTGACTGCTCTTCAAGACAAGATTTCTAAAGGAGCACCAGTTTTGGATC TTTGCTGTGGGTCTGGCGAAACAGCAGCACCATGGATCGAGGCTGGTTTCGCTGTAACAGGTTTAGATCTTTCACCAAAG GCACTGGCACTAGCAGCTGAACGAACCCCCCAACTGCAATGCATCGAGGGAATGGCAGAAAAACCACCGCTGAACACCAG CCAATTTGCGGCCATCCAAATCAGCCTGGCCTTGCACGAATTCAGCTCAGAAGAACGACAACAAGTGCTCAAAGCCTGCA TGCGCCTTTTGCAACCGGGGGGTTGGCTAGTGCTGATAGACCTCCATCCAGCAGGCCCCTGCCTCAAACTGCCCCAACAG TTGTTTTGTGCCCTGTTCGAAACTGAAACCGCTCTCACAATGCTGCAAGCAGACTTGCCCAAGCAACTTCGGGAGATGGG TTACAGCACTATTGAGCAAGAACTATTAGCAGGCCGAGCACTACAACGAATCACAGCCCGCCTTCCATAA
Upstream 100 bases:
>100_bases GCCATTCAGTGGCTATTCATACCCGCACCTATCACCACTGGATCACCCGACGTGACCAACAACAAGCGGTAGATGCAGCC CTAGCTCGACAGCTCAGCCC
Downstream 100 bases:
>100_bases GCAACCCAACTCAAAGCATGCTCAAGACCTTGCCAACACTTTGATGACCAACCCGCCAGCTCCGCATTCGCCCTCTTCAA CCGAACTCGATCACAGCGCA
Product: methyltransferase
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTSPLRTFAYEHRWFYDLVTTISALSVGGVKRLRSLGLTALQDKISKGAPVLDLCCGSGETAAPWIEAGFAVTGLDLSPK ALALAAERTPQLQCIEGMAEKPPLNTSQFAAIQISLALHEFSSEERQQVLKACMRLLQPGGWLVLIDLHPAGPCLKLPQQ LFCALFETETALTMLQADLPKQLREMGYSTIEQELLAGRALQRITARLP
Sequences:
>Translated_209_residues MTSPLRTFAYEHRWFYDLVTTISALSVGGVKRLRSLGLTALQDKISKGAPVLDLCCGSGETAAPWIEAGFAVTGLDLSPK ALALAAERTPQLQCIEGMAEKPPLNTSQFAAIQISLALHEFSSEERQQVLKACMRLLQPGGWLVLIDLHPAGPCLKLPQQ LFCALFETETALTMLQADLPKQLREMGYSTIEQELLAGRALQRITARLP >Mature_208_residues TSPLRTFAYEHRWFYDLVTTISALSVGGVKRLRSLGLTALQDKISKGAPVLDLCCGSGETAAPWIEAGFAVTGLDLSPKA LALAAERTPQLQCIEGMAEKPPLNTSQFAAIQISLALHEFSSEERQQVLKACMRLLQPGGWLVLIDLHPAGPCLKLPQQL FCALFETETALTMLQADLPKQLREMGYSTIEQELLAGRALQRITARLP
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 22833; Mature: 22702
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLRTFAYEHRWFYDLVTTISALSVGGVKRLRSLGLTALQDKISKGAPVLDLCCGSGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCC TAAPWIEAGFAVTGLDLSPKALALAAERTPQLQCIEGMAEKPPLNTSQFAAIQISLALHE CCCHHHHCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHEEHHHHHHH FSSEERQQVLKACMRLLQPGGWLVLIDLHPAGPCLKLPQQLFCALFETETALTMLQADLP HCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQLREMGYSTIEQELLAGRALQRITARLP HHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSPLRTFAYEHRWFYDLVTTISALSVGGVKRLRSLGLTALQDKISKGAPVLDLCCGSGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCC TAAPWIEAGFAVTGLDLSPKALALAAERTPQLQCIEGMAEKPPLNTSQFAAIQISLALHE CCCHHHHCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHEEHHHHHHH FSSEERQQVLKACMRLLQPGGWLVLIDLHPAGPCLKLPQQLFCALFETETALTMLQADLP HCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KQLREMGYSTIEQELLAGRALQRITARLP HHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]