| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is chlN [H]
Identifier: 33863484
GI number: 33863484
Start: 1302022
End: 1303278
Strand: Direct
Name: chlN [H]
Synonym: PMT1215
Alternate gene names: 33863484
Gene position: 1302022-1303278 (Clockwise)
Preceding gene: 33863479
Following gene: 33863485
Centisome position: 54.01
GC content: 54.49
Gene sequence:
>1257_bases ATGGGCAGCGCCACGCTTCTAAAAGAAAGCGGACCGCGGGAGGTTTTCTGCGGATTGACTTCAATTGTTTGGCTACATCG GCGCATGCCGGATGCCTTCTTCCTCGTTGTGGGCTCTCGCACCTGCGCCCACCTCATCCAAAGCGCCGCAGGCGTGATGA TCTTTGCCGAGCCGCGTTTTGGCACCGCAATCTTGGGGGAGAAAGACCTCGCGGGGCTGGCAGATGCTCATGATGAGCTC GATCGAGTGGTGAACGATTTACTGGCTCGGCGCCCAGAAATTCGCACCCTCTTTCTGGTGGGTTCCTGCCCCAGCGAAGT GATCAAGTTAGATCTGGCAAGAGTGGCCGAGCGACTCAATGGAGAGCTTCAAGGTCGCGTACGCGTGCTGAATTACTCAG GCAGCGGAATTGAAACCACCTTTACCCAAGGTGAGGACGGTGCGCTCAAAGCCATGGTGCCGTTGATGCCCAACAGCAAC GAAGCCCAGCTTCTGCTTGTTGGCACCATGGCCAACGCGGTTGAAGATCGTCTCATCCATTTATTCGAACGCCTGGGCAT CCCCTCAGTGTCCAGCTTGCCGCCCAGGCAGTCGACTGATCTGCCATCCGTAGGGCCTGGCACCCGTGTTCTGCTAACCC AGCCCTACTTAACTGACACGGCTAGGGAACTCAAAGACAGAGGCGCCGAGATCCTTCAAGCGCCTTTCCCTCTGGGAGCT GAGGGAAGCCGACTCTGGATGGAAGCGGCAGCCAAAGCTTTTGGCATCAACAACAATCACGTCGCAAATACTCTTGCGCC ATTAATCGAGCGCGCCCAAAAGGCTTTATCGCCCTACAAAGAGCAACTGGCTGGAAAGCGAATTTTCCTGATGCCTGAAT CCCAGTTAGAAATTCCACTAGCGCGTTTCCTTCACAGAGAATGTGGAATGGAACTTGTAGAAGTTGGAGTTCCTTATCTC AATCGAGAGATGATGCAGTCTGAATTGGAACTGCTGCCGCAAAACACTCCAGTAATGGAAGGACAGCATGTCGAGAAGCA GCTCGACAGGGTTAGGGAGCAGCGGCCCGATCTAGTTGTCTGCGGTATGGGTTTGGCAAATCCCCTTGAAGCGGAAGAGA TTGCTACGAAATGGTCAATCGAATTGATCTTTAGCCCCATCCACGGCATTGATCAAGCCGCAGACCTCGCCGAACTGTTT GCAAGGCCACTGCATCGCCGCAACCTTCTCAACAACCAACTCCTCGTAAGCGTCTAA
Upstream 100 bases:
>100_bases CTCAAGCAAAAAGCTTCCCCTCGATCCCAAAGAGTTTTAGTTGCTAATTAAGAGTTGGCCATGAACTCGGCAACTTGGTA GAGAGCTCTTCAAGCAGCCC
Downstream 100 bases:
>100_bases AAAACCAATGGAACTCACTCTCTGGACCTATGAAGGGCCTCCTCACGTAGGAGCCATGCGCATCGCTTCCTCGATGGAAG GAGTGCATTATGTGTTGCAT
Product: light-independent protochlorophyllide reductase subunit N
Products: NA
Alternate protein names: DPOR subunit N; LI-POR subunit N [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MGSATLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGEKDLAGLADAHDEL DRVVNDLLARRPEIRTLFLVGSCPSEVIKLDLARVAERLNGELQGRVRVLNYSGSGIETTFTQGEDGALKAMVPLMPNSN EAQLLLVGTMANAVEDRLIHLFERLGIPSVSSLPPRQSTDLPSVGPGTRVLLTQPYLTDTARELKDRGAEILQAPFPLGA EGSRLWMEAAAKAFGINNNHVANTLAPLIERAQKALSPYKEQLAGKRIFLMPESQLEIPLARFLHRECGMELVEVGVPYL NREMMQSELELLPQNTPVMEGQHVEKQLDRVREQRPDLVVCGMGLANPLEAEEIATKWSIELIFSPIHGIDQAADLAELF ARPLHRRNLLNNQLLVSV
Sequences:
>Translated_418_residues MGSATLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGEKDLAGLADAHDEL DRVVNDLLARRPEIRTLFLVGSCPSEVIKLDLARVAERLNGELQGRVRVLNYSGSGIETTFTQGEDGALKAMVPLMPNSN EAQLLLVGTMANAVEDRLIHLFERLGIPSVSSLPPRQSTDLPSVGPGTRVLLTQPYLTDTARELKDRGAEILQAPFPLGA EGSRLWMEAAAKAFGINNNHVANTLAPLIERAQKALSPYKEQLAGKRIFLMPESQLEIPLARFLHRECGMELVEVGVPYL NREMMQSELELLPQNTPVMEGQHVEKQLDRVREQRPDLVVCGMGLANPLEAEEIATKWSIELIFSPIHGIDQAADLAELF ARPLHRRNLLNNQLLVSV >Mature_417_residues GSATLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRFGTAILGEKDLAGLADAHDELD RVVNDLLARRPEIRTLFLVGSCPSEVIKLDLARVAERLNGELQGRVRVLNYSGSGIETTFTQGEDGALKAMVPLMPNSNE AQLLLVGTMANAVEDRLIHLFERLGIPSVSSLPPRQSTDLPSVGPGTRVLLTQPYLTDTARELKDRGAEILQAPFPLGAE GSRLWMEAAAKAFGINNNHVANTLAPLIERAQKALSPYKEQLAGKRIFLMPESQLEIPLARFLHRECGMELVEVGVPYLN REMMQSELELLPQNTPVMEGQHVEKQLDRVREQRPDLVVCGMGLANPLEAEEIATKWSIELIFSPIHGIDQAADLAELFA RPLHRRNLLNNQLLVSV
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BchN/ChlN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR005970 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: 1.18.-.-
Molecular weight: Translated: 46062; Mature: 45931
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSATLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRF CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC GTAILGEKDLAGLADAHDELDRVVNDLLARRPEIRTLFLVGSCPSEVIKLDLARVAERLN CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC GELQGRVRVLNYSGSGIETTFTQGEDGALKAMVPLMPNSNEAQLLLVGTMANAVEDRLIH CCEECEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHH LFERLGIPSVSSLPPRQSTDLPSVGPGTRVLLTQPYLTDTARELKDRGAEILQAPFPLGA HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCC EGSRLWMEAAAKAFGINNNHVANTLAPLIERAQKALSPYKEQLAGKRIFLMPESQLEIPL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH ARFLHRECGMELVEVGVPYLNREMMQSELELLPQNTPVMEGQHVEKQLDRVREQRPDLVV HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEE CGMGLANPLEAEEIATKWSIELIFSPIHGIDQAADLAELFARPLHRRNLLNNQLLVSV ECCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure GSATLLKESGPREVFCGLTSIVWLHRRMPDAFFLVVGSRTCAHLIQSAAGVMIFAEPRF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCC GTAILGEKDLAGLADAHDELDRVVNDLLARRPEIRTLFLVGSCPSEVIKLDLARVAERLN CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHC GELQGRVRVLNYSGSGIETTFTQGEDGALKAMVPLMPNSNEAQLLLVGTMANAVEDRLIH CCEECEEEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHH LFERLGIPSVSSLPPRQSTDLPSVGPGTRVLLTQPYLTDTARELKDRGAEILQAPFPLGA HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCCCC EGSRLWMEAAAKAFGINNNHVANTLAPLIERAQKALSPYKEQLAGKRIFLMPESQLEIPL CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH ARFLHRECGMELVEVGVPYLNREMMQSELELLPQNTPVMEGQHVEKQLDRVREQRPDLVV HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEE CGMGLANPLEAEEIATKWSIELIFSPIHGIDQAADLAELFARPLHRRNLLNNQLLVSV ECCCCCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA