Click here to switch to the map view.

The map label for this gene is 33863479

Identifier: 33863479

GI number: 33863479

Start: 1296988

End: 1297389

Strand: Direct

Name: 33863479

Synonym: PMT1209

Alternate gene names: NA

Gene position: 1296988-1297389 (Clockwise)

Preceding gene: 33863477

Following gene: 33863484

Centisome position: 53.8

GC content: 50.75

Gene sequence:

>402_bases
ATGGCCACCATGCAAGAAAAAAAATCTGAATCTACAAACCTTCCAACAGACCTAAAAGCAGAGCAAGCCTTGGGTTTAAT
TGGTTTGGGCCTGATGCAAAAAATGCGGGAAGGTGCAAGTGAATGGACATGGTCTCAAGCTGAGACTGGCGGACAAGCCG
ATCTTTTAGCTCTGCGACAACGCCTCGAGCTCACATCTTTGGCCATTCAAACTGGTGCTCCACTTAGCACAGCTGAGGTG
TCAAAACTTCTTGGCGCTAGACCCGGCTCAAAGGAAGTCAGACGAGGAGGGCTGATCGCAAGGCGAGTCAGCAGAAACGT
TTGGAAGCTCAGCAGTTCCGACAAAACTCCAGAGCGCAATGTTGATGGATTCAGCGGCGATGGATTCCGTCGCCGCCTTT
GA

Upstream 100 bases:

>100_bases
GCGGGGATAATACCTTGTGATTGAACATATCTTTCAAATGCACTGCTCTTGCAAGTGGCCTTAGAGCCGATACCGTCCAA
ATCAATGATTGGGATGGACT

Downstream 100 bases:

>100_bases
ATCCCTTAAAAATTAATCATCAAACTGATCAATCTCCAGAAGAGATTATCTTTAATCATTCATCTTCTGACTCCTCTTCA
TCGTCTGACTCTCCTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MATMQEKKSESTNLPTDLKAEQALGLIGLGLMQKMREGASEWTWSQAETGGQADLLALRQRLELTSLAIQTGAPLSTAEV
SKLLGARPGSKEVRRGGLIARRVSRNVWKLSSSDKTPERNVDGFSGDGFRRRL

Sequences:

>Translated_133_residues
MATMQEKKSESTNLPTDLKAEQALGLIGLGLMQKMREGASEWTWSQAETGGQADLLALRQRLELTSLAIQTGAPLSTAEV
SKLLGARPGSKEVRRGGLIARRVSRNVWKLSSSDKTPERNVDGFSGDGFRRRL
>Mature_132_residues
ATMQEKKSESTNLPTDLKAEQALGLIGLGLMQKMREGASEWTWSQAETGGQADLLALRQRLELTSLAIQTGAPLSTAEVS
KLLGARPGSKEVRRGGLIARRVSRNVWKLSSSDKTPERNVDGFSGDGFRRRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14512; Mature: 14381

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMQEKKSESTNLPTDLKAEQALGLIGLGLMQKMREGASEWTWSQAETGGQADLLALRQ
CCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCCHHHHHHHHH
RLELTSLAIQTGAPLSTAEVSKLLGARPGSKEVRRGGLIARRVSRNVWKLSSSDKTPERN
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
VDGFSGDGFRRRL
CCCCCCCCCCCCC
>Mature Secondary Structure 
ATMQEKKSESTNLPTDLKAEQALGLIGLGLMQKMREGASEWTWSQAETGGQADLLALRQ
CCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCCHHHHHHHHH
RLELTSLAIQTGAPLSTAEVSKLLGARPGSKEVRRGGLIARRVSRNVWKLSSSDKTPERN
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
VDGFSGDGFRRRL
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA