Click here to switch to the map view.

The map label for this gene is cytM [H]

Identifier: 33863402

GI number: 33863402

Start: 1222915

End: 1223316

Strand: Direct

Name: cytM [H]

Synonym: PMT1131

Alternate gene names: 33863402

Gene position: 1222915-1223316 (Clockwise)

Preceding gene: 33863400

Following gene: 33863403

Centisome position: 50.72

GC content: 53.23

Gene sequence:

>402_bases
TTGTTTCATGCTCCTGAACTCACCGTGACGGGCCCGTCATCAAACAATCAAAGAAAAAACGGGTTCATTGGACCCCTAGT
GGTACTGGCAGCAGCTGTCTGCATTGCAATTTTGTTATGGGTACTAGGGCACTCACAACGAGACCCCTACGTCAACGCCA
CCCTTGATTTAGAGGGATCTTTGGAGCAAGGAGGTCGGCTGTTCCGCATCAACTGCGCTGGCTGCCACGGGATTACTGCC
CAAGGAAACTTAGGCCCGAATCTCCTTGACGTGAGCGAACGCCGCAACGACGCCCAGCTGATCAGGCAAGTGGTAAGCGG
CAATACGCCGCCCATGCCCAGGTTCCAGCTTGAGCCTCAAGAAATGGCCGACCTACTGGCTTATTTAAATTCCCTGAATT
GA

Upstream 100 bases:

>100_bases
ACAAACAATCCAAGCAAAGTGACCGGAATTAAACCCAGAACGATGCCGCAGAGAAGTGGTTCGATCATGGCCTCGCGCCC
AGTTGAAAGATTAAGCACAA

Downstream 100 bases:

>100_bases
ACAAGGACATCCGCTCAATCCAAACGACTGTTGTTCTGGTTGAGCCAATTGGTCCACTGAATCTGGGCAGTGTGGCCAGA
CTCTGCGCCAACTTCGGAGT

Product: cytochrome c, class IC:cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MFHAPELTVTGPSSNNQRKNGFIGPLVVLAAAVCIAILLWVLGHSQRDPYVNATLDLEGSLEQGGRLFRINCAGCHGITA
QGNLGPNLLDVSERRNDAQLIRQVVSGNTPPMPRFQLEPQEMADLLAYLNSLN

Sequences:

>Translated_133_residues
MFHAPELTVTGPSSNNQRKNGFIGPLVVLAAAVCIAILLWVLGHSQRDPYVNATLDLEGSLEQGGRLFRINCAGCHGITA
QGNLGPNLLDVSERRNDAQLIRQVVSGNTPPMPRFQLEPQEMADLLAYLNSLN
>Mature_133_residues
MFHAPELTVTGPSSNNQRKNGFIGPLVVLAAAVCIAILLWVLGHSQRDPYVNATLDLEGSLEQGGRLFRINCAGCHGITA
QGNLGPNLLDVSERRNDAQLIRQVVSGNTPPMPRFQLEPQEMADLLAYLNSLN

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14419; Mature: 14419

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHAPELTVTGPSSNNQRKNGFIGPLVVLAAAVCIAILLWVLGHSQRDPYVNATLDLEGS
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
LEQGGRLFRINCAGCHGITAQGNLGPNLLDVSERRNDAQLIRQVVSGNTPPMPRFQLEPQ
CCCCCEEEEEEECCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHCCCCCCCCCEEECHH
EMADLLAYLNSLN
HHHHHHHHHHHCC
>Mature Secondary Structure
MFHAPELTVTGPSSNNQRKNGFIGPLVVLAAAVCIAILLWVLGHSQRDPYVNATLDLEGS
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
LEQGGRLFRINCAGCHGITAQGNLGPNLLDVSERRNDAQLIRQVVSGNTPPMPRFQLEPQ
CCCCCEEEEEEECCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHCCCCCCCCCEEECHH
EMADLLAYLNSLN
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]