| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is opcA [H]
Identifier: 33863374
GI number: 33863374
Start: 1195021
End: 1196310
Strand: Direct
Name: opcA [H]
Synonym: PMT1103
Alternate gene names: 33863374
Gene position: 1195021-1196310 (Clockwise)
Preceding gene: 33863373
Following gene: 33863375
Centisome position: 49.57
GC content: 57.52
Gene sequence:
>1290_bases ATGTCCCCCCAGCTCACGCTTCAGAGCCCTCTGCAACTCCCTCCTAGTGAGGTCCCTAGCTATCTCGAGCAGCTCTGGTT AAACGATCAACCTGGCAACACAGGCGCCAAAACATTCTCCCTGCTGGTTTGGCAGCCGGCCTGGGTCGAACAGCAGCTGG TTAGAACCGGCCAGATTGATGGCCCGATCATTGGATCGCAGAGCCAAGAGCTCATCCAAGCTGCCCGCCAAGCCGTTACC GAAGGCGATCTACCCCACAGCACACCTCCTCTGGATTCAAGTGTTGCAGCAGTCCTTGCCAATCGCAAAGGCAATCAACA TGGCGAGGATTTACGTGGGCAACACATTGATGCTGCCATCAGTGCCTTAGAACCCCGACGCCTGATCACACTGGCACCAA CCCTCGAGAAGGGGCATGACCTCGAGACACTCGTGGCTGCTTATTGCCCATTACCAGAAGAAGGAGGAGGAAACAGCGCC TGCGGAGATGTGGTGGTGCTTCGCGGTGACCATCACGCCCTAACAGATGGGCTGGGAATCCTTCAACCTCTACTACCTGC AGAACTGCCCTCCTGGGTCTGGTGGAACGGCAGCCTGGACGAAGCCCCCGAATTGCTCGAGCGGCTGGCTGTGACCCCAC GGCGCCTGGTGATCGATACAGCACTAGGAGATCCCCATCGCTGCATTGAGCTGCTCAATGCCCATGTGGAAGCAGGCCGA GCGGTGAATGATCTGAATTGGTTAAGGCTGCGCACTTGGCGAGAACACCTCGCAATGGTGTTTGACCCACCACACCGCCG CAATGCCCTTAGTCATGTTGATCAGCTCGAAATCGACGTTGAGGGTCATCACCCCGTCCAGGGGCTGTTGTTAGCCGCCT GGATCGCCGATCGACTGGGATGGCAATTACAAGCCACCCAGACAATAAAAGGGGAAGGCATTGCTGCCGAATTCCGCCGA ACCGATGGCACCACTGTTCAGTTTCGCCTTATGCCTGTACCCATGGGGCAACCGAGCATTCATCCTGGCCAGATCGTGGG GGTCAGGTTGATCTGCAAGCCAGATGCACAACTCGAACATGCCGTTTGCGTGATTCTCTGTGCCGAATCTGGCGGCTGCA TGAGACTCGAAGCAGGTGGCATGGCCAGCATGGAGCTGATTGAAGAAGTCGTCCCCATGCAGGTCGCCTCTGTAGAGATG GATGTAGCCAGACTCCTCGCTGGTGGCCATAACAGCACCACCCCCCTGCTTGCCGCTGCAGCCCCCCTTGCTGCCAAGCT GCTTAGCTAA
Upstream 100 bases:
>100_bases GGCCCGCTGCTGCCGATACCCTGCTTGCCAATGACGGATTGCTCTGGCGCCGACCCTGATTCCGCCTGGCTCATCTCATC TTGATTACTCAGCTCTATCC
Downstream 100 bases:
>100_bases GACCCCCCTTTGGCGAAGCCCTTTTTCAGCCGCCACCCGTCATGGCCTGTGTGATTGCTGCCCCAGCCAGTGGCACTGGA AAAACCTTACTAAGCCTCAC
Product: glucose 6-phosphate dehydrogenase effector OpcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVT EGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLEKGHDLETLVAAYCPLPEEGGGNSA CGDVVVLRGDHHALTDGLGILQPLLPAELPSWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLNAHVEAGR AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLQATQTIKGEGIAAEFRR TDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEM DVARLLAGGHNSTTPLLAAAAPLAAKLLS
Sequences:
>Translated_429_residues MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVT EGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLEKGHDLETLVAAYCPLPEEGGGNSA CGDVVVLRGDHHALTDGLGILQPLLPAELPSWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLNAHVEAGR AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLQATQTIKGEGIAAEFRR TDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEM DVARLLAGGHNSTTPLLAAAAPLAAKLLS >Mature_428_residues SPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQIDGPIIGSQSQELIQAARQAVTE GDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAISALEPRRLITLAPTLEKGHDLETLVAAYCPLPEEGGGNSAC GDVVVLRGDHHALTDGLGILQPLLPAELPSWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLNAHVEAGRA VNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLGWQLQATQTIKGEGIAAEFRRT DGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEHAVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMD VARLLAGGHNSTTPLLAAAAPLAAKLLS
Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019297 - InterPro: IPR004555 - InterPro: IPR002477 [H]
Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 46438; Mature: 46307
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQID CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCC GPIIGSQSQELIQAARQAVTEGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAI CCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHH SALEPRRLITLAPTLEKGHDLETLVAAYCPLPEEGGGNSACGDVVVLRGDHHALTDGLGI HHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH LQPLLPAELPSWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLNAHVEAGR HHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLG CCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHC WQLQATQTIKGEGIAAEFRRTDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEH CEEEEEEEECCCCCEEHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC AVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMDVARLLAGGHNSTTPLLAAA EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH APLAAKLLS HHHHHHHCC >Mature Secondary Structure SPQLTLQSPLQLPPSEVPSYLEQLWLNDQPGNTGAKTFSLLVWQPAWVEQQLVRTGQID CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCC GPIIGSQSQELIQAARQAVTEGDLPHSTPPLDSSVAAVLANRKGNQHGEDLRGQHIDAAI CCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHCCCHHHHHH SALEPRRLITLAPTLEKGHDLETLVAAYCPLPEEGGGNSACGDVVVLRGDHHALTDGLGI HHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH LQPLLPAELPSWVWWNGSLDEAPELLERLAVTPRRLVIDTALGDPHRCIELLNAHVEAGR HHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCC AVNDLNWLRLRTWREHLAMVFDPPHRRNALSHVDQLEIDVEGHHPVQGLLLAAWIADRLG CCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHC WQLQATQTIKGEGIAAEFRRTDGTTVQFRLMPVPMGQPSIHPGQIVGVRLICKPDAQLEH CEEEEEEEECCCCCEEHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCC AVCVILCAESGGCMRLEAGGMASMELIEEVVPMQVASVEMDVARLLAGGHNSTTPLLAAA EEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH APLAAKLLS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566707 [H]