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The map label for this gene is lytR [H]

Identifier: 33863343

GI number: 33863343

Start: 1158117

End: 1159118

Strand: Direct

Name: lytR [H]

Synonym: PMT1072

Alternate gene names: 33863343

Gene position: 1158117-1159118 (Clockwise)

Preceding gene: 33863341

Following gene: 33863345

Centisome position: 48.04

GC content: 54.69

Gene sequence:

>1002_bases
ATGCCGCTGTCCTCAACACGGTTGATGCCTACACAAGATTCAGGCAAAACGCCAACGCCATCAAGCGTGGGTCACTGGAT
GGGGAAATATCCAGGCCGTACCTTGCTACGCCTGGCTGCGACCCTGGGTGGTCTTTGGCTGGCAAGCACGGCCCTGGGGC
TGCTCTGGCCGAAGCCCGATCAAGTCGCCAAAGGCGATCCATCAGTGGACAAAGCAACCTCCCTAGCGCCGCTTCCCAAA
CAACCAATCATCATCTTGTTAGTGGGCATTGATTCGGACCAACTGAACGATCTCACAAACCAAGCTGCACCGATGGGTTC
AGCCAATGCAGACAGCCTGATGCTCGTGAAGGTAGCGGCCAAGCAACCTGTTGAAGTGCTTCAGCTGCCTATTGAACTCG
CTGTGACCCTGCCTGGAAGCAATGGGATGCAACCACTAGCGTCAAGTTACGGGCGGGGGGGGATTGCCCTTACCGCCGAT
GTGATTGCGGAAATCCTCGGCCTTAGAAAAGGACAACCCCATCGCTTTGTGGTGATCCCCCGCAAAGCGCTAAGAGTCCT
TGTCGATGGACTCGGAGATGTGGAGGTCAACCTCAACGCGCCTTTTAAACACCAAGACAATGCCCAGAACTATTCGGTGG
ACCTGCAAGCAGGACGGCAGAGACTTAATGGAGGCCAGGTAGAACAACTGGTTCGCTACCGCGCTGGTCCTGAAGAAGAA
AGCGGTCGGCGTCAAAGACAACAATGGATCCTGAACGGTCTGTCTAGACAATTGCGACAGCCAAACACCCTCGCAAAACT
CCCCAAACTTCTGAAAGAGTTTTCAAAAGAAGTGCAAACCGATATAACCCCTCGTGAGTTGTTAAGCCTCACGGCAGCGG
CTCTTAGCAACAATCAATTCCCAATCATCAGCGAATTACCTCTAGCCCCACGAGCCGGGGAACAAACCCTGCGGCAACTG
AAAGCAAGCCACCCCATGCCGCTCTGGCCGCAGGGCAACTAA

Upstream 100 bases:

>100_bases
GGGTCGTTACATACTCGCAAGATGCCTTGTCAGAAGTCTCGGTTAGTCCAAAAGCCATTGGACTTTTAACCCTAAAGAGC
TGTAGTTGAGCAAGACTGTG

Downstream 100 bases:

>100_bases
CAGGGCCTCATCAATCGGGCGACAGCAGCAGCCGTCGACGCAATTGCACCACGAGCTCCTCCAAAGAGGGCCCCTGCTGC
AAGCCGCCCGCATTAGGGAC

Product: LytR-membrane bound transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPLSSTRLMPTQDSGKTPTPSSVGHWMGKYPGRTLLRLAATLGGLWLASTALGLLWPKPDQVAKGDPSVDKATSLAPLPK
QPIIILLVGIDSDQLNDLTNQAAPMGSANADSLMLVKVAAKQPVEVLQLPIELAVTLPGSNGMQPLASSYGRGGIALTAD
VIAEILGLRKGQPHRFVVIPRKALRVLVDGLGDVEVNLNAPFKHQDNAQNYSVDLQAGRQRLNGGQVEQLVRYRAGPEEE
SGRRQRQQWILNGLSRQLRQPNTLAKLPKLLKEFSKEVQTDITPRELLSLTAAALSNNQFPIISELPLAPRAGEQTLRQL
KASHPMPLWPQGN

Sequences:

>Translated_333_residues
MPLSSTRLMPTQDSGKTPTPSSVGHWMGKYPGRTLLRLAATLGGLWLASTALGLLWPKPDQVAKGDPSVDKATSLAPLPK
QPIIILLVGIDSDQLNDLTNQAAPMGSANADSLMLVKVAAKQPVEVLQLPIELAVTLPGSNGMQPLASSYGRGGIALTAD
VIAEILGLRKGQPHRFVVIPRKALRVLVDGLGDVEVNLNAPFKHQDNAQNYSVDLQAGRQRLNGGQVEQLVRYRAGPEEE
SGRRQRQQWILNGLSRQLRQPNTLAKLPKLLKEFSKEVQTDITPRELLSLTAAALSNNQFPIISELPLAPRAGEQTLRQL
KASHPMPLWPQGN
>Mature_332_residues
PLSSTRLMPTQDSGKTPTPSSVGHWMGKYPGRTLLRLAATLGGLWLASTALGLLWPKPDQVAKGDPSVDKATSLAPLPKQ
PIIILLVGIDSDQLNDLTNQAAPMGSANADSLMLVKVAAKQPVEVLQLPIELAVTLPGSNGMQPLASSYGRGGIALTADV
IAEILGLRKGQPHRFVVIPRKALRVLVDGLGDVEVNLNAPFKHQDNAQNYSVDLQAGRQRLNGGQVEQLVRYRAGPEEES
GRRQRQQWILNGLSRQLRQPNTLAKLPKLLKEFSKEVQTDITPRELLSLTAAALSNNQFPIISELPLAPRAGEQTLRQLK
ASHPMPLWPQGN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 36057; Mature: 35926

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSSTRLMPTQDSGKTPTPSSVGHWMGKYPGRTLLRLAATLGGLWLASTALGLLWPKPD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QVAKGDPSVDKATSLAPLPKQPIIILLVGIDSDQLNDLTNQAAPMGSANADSLMLVKVAA
CCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECC
KQPVEVLQLPIELAVTLPGSNGMQPLASSYGRGGIALTADVIAEILGLRKGQPHRFVVIP
CCCHHHHHCCEEEEEECCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEC
RKALRVLVDGLGDVEVNLNAPFKHQDNAQNYSVDLQAGRQRLNGGQVEQLVRYRAGPEEE
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHCCCCHH
SGRRQRQQWILNGLSRQLRQPNTLAKLPKLLKEFSKEVQTDITPRELLSLTAAALSNNQF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PIISELPLAPRAGEQTLRQLKASHPMPLWPQGN
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PLSSTRLMPTQDSGKTPTPSSVGHWMGKYPGRTLLRLAATLGGLWLASTALGLLWPKPD
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QVAKGDPSVDKATSLAPLPKQPIIILLVGIDSDQLNDLTNQAAPMGSANADSLMLVKVAA
CCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECC
KQPVEVLQLPIELAVTLPGSNGMQPLASSYGRGGIALTADVIAEILGLRKGQPHRFVVIP
CCCHHHHHCCEEEEEECCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEC
RKALRVLVDGLGDVEVNLNAPFKHQDNAQNYSVDLQAGRQRLNGGQVEQLVRYRAGPEEE
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHHHCCCCHH
SGRRQRQQWILNGLSRQLRQPNTLAKLPKLLKEFSKEVQTDITPRELLSLTAAALSNNQF
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PIISELPLAPRAGEQTLRQLKASHPMPLWPQGN
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12663927 [H]