| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863182
Identifier: 33863182
GI number: 33863182
Start: 993667
End: 994536
Strand: Reverse
Name: 33863182
Synonym: PMT0910
Alternate gene names: NA
Gene position: 994536-993667 (Counterclockwise)
Preceding gene: 33863183
Following gene: 33863178
Centisome position: 41.25
GC content: 53.33
Gene sequence:
>870_bases TTGAGTGAATCAATCACCATGAATCTCTTGGAACCCCAGGATCTGCCAGATCTTCCCAAGCTGAAGTTGGCCGTTGTGGG CCACGTTGAATGGGTGACCTTCCTGTCTACAGATCAATTACCCCAGCCTGGGGTAATCAGCCATGCAGATCATTCTTTTG AAGAGCCCGCTGGCGGTGGAGCTGTCGTCGCGGTGCAATTGGCTCGGCTCGTTAAACAACCCGTTCAATTCATAACAGCT CTAGGTCGAGATTCATGCGGTGAAAAGAGTTTTCAAAGACTCCAGCAGCTTGGCTTAAGCCTGACTGTGGCTTGGCGTGA TCAACCCACTCGTCGGGCGATCAGCCTTGTTGATTCTCATGGGGAACGGGCAATTACAGTGATTGGCGAGCGTTTACAAC CCAGAGCAAAAGATGCGCTGGGCTGGGGAGCCCTTGCTGGTTACGACGGTGTTTTTGTGACCGCTGCAGATGCACCTGCA CTGCATCATTGTCGTCATGCTGGTGTGATGGCAGCTACTCCTCGCGTGCGTCTAGAGACACTTGAGCAGGCGAATATTCA GCTTGATGCGCTGATTGGTAGTGGTCTTGATCCAGGCGAACACGTTCCAGATAAAGCGCTCTTTCCAACTCCCCGGCTGA GAATTGCAACTGAAGGAGCTTTAGGCGGTCAGCTATGGCCTGGGGGACGCTATCAGGCTGTTTCACTGAAGTCTCCAGTC GTGGATGCTTATGGCTGTGGCGATAGCTTTGCCGCTGGGGTAACTGCAGGTTTGGCTGCTGGTTGGACTGATGAACAGGC GATCAGCCTAGGGGCTCACTGCGGTGCAAGCTGTGCAACTCATTTTGGGCCTTACTCCAGTGATGAGTGA
Upstream 100 bases:
>100_bases GATCATGGCCTAAGCGAGCGGCCCAGGCTTGTTACTAGTCAAATCGATAGCCAACAGCCCCATCGGCGTGACCATGCCGT ACTGATGCATCCTTTTTCTA
Downstream 100 bases:
>100_bases GTCTGAGAGTTGGGCGTTAATTCGACCTTCAGACTTGAAGGCAAGCCTGCCAATAACTTGTGAGCAGCTTGAAGTGAGGA TCAACCTGATTCACTTAGGC
Product: pfkB family carbohydrate kinase
Products: ADP; D-ribose 5-phosphate
Alternate protein names: Ribokinase Family Sugar Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSESITMNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITA LGRDSCGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPA LHHCRHAGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPV VDAYGCGDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
Sequences:
>Translated_289_residues MSESITMNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITA LGRDSCGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPA LHHCRHAGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPV VDAYGCGDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE >Mature_288_residues SESITMNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGGAVVAVQLARLVKQPVQFITAL GRDSCGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSHGERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPAL HHCRHAGVMAATPRVRLETLEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPVV DAYGCGDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.15
Molecular weight: Translated: 30507; Mature: 30376
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESITMNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGG CCCCEEEEEECCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC AVVAVQLARLVKQPVQFITALGRDSCGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC GERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLET CCEEEEEECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHH LEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPV HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCC VDAYGCGDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE EEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure SESITMNLLEPQDLPDLPKLKLAVVGHVEWVTFLSTDQLPQPGVISHADHSFEEPAGGG CCCEEEEEECCCCCCCCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC AVVAVQLARLVKQPVQFITALGRDSCGEKSFQRLQQLGLSLTVAWRDQPTRRAISLVDSH HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCC GERAITVIGERLQPRAKDALGWGALAGYDGVFVTAADAPALHHCRHAGVMAATPRVRLET CCEEEEEECHHCCCHHHHHCCCCHHCCCCCEEEEECCCCHHHHHHHCCCEECCCCHHHHH LEQANIQLDALIGSGLDPGEHVPDKALFPTPRLRIATEGALGGQLWPGGRYQAVSLKSPV HHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCC VDAYGCGDSFAAGVTAGLAAGWTDEQAISLGAHCGASCATHFGPYSSDE EEECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; D-ribose
Specific reaction: ATP + D-ribose = ADP + D-ribose 5-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA