Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863178

Identifier: 33863178

GI number: 33863178

Start: 987853

End: 988176

Strand: Reverse

Name: 33863178

Synonym: PMT0906

Alternate gene names: NA

Gene position: 988176-987853 (Counterclockwise)

Preceding gene: 33863182

Following gene: 33863177

Centisome position: 40.99

GC content: 50.62

Gene sequence:

>324_bases
ATGGTGCCACAGCTGCTGGCTGGCTCAATGGCACGAGTAGCTTCCAAGGCGATCAGGCAGTACATGAACCTGAATCAATA
TCAAGTTGATTTAGGTATTTTGATCAAGTTCACAGGCAAGATCGCATTGGGTCAGCGCTGGGTTGGTCAATCGCTCGAGT
ACTCGTGCCATATCCACCGCAGACAACTCTCCGTTGCTGTTCCACTTGAAGGTGGTTTTGCGTTGGGGAGGGCTTTTGTC
GGGTTTTGGTGTTCTGGGGTTTTGGGTGCTCATGATTGGCTCCCTGTATCGGGTGATACATATAAGCCTGAGAAGCACTG
CTGA

Upstream 100 bases:

>100_bases
TTGTCAAAACAAGTGCTAGTAAGGCTATTAGAGTCGCTGTTCTCTTCAGCCTGATCATGAAGGTCTTGAGAATTGTCATG
GCGATCTATTTGTCTTGTTG

Downstream 100 bases:

>100_bases
AGCTCAATTCTTACCCAACCTTTACTCAGCTTTTCTTTAGATTTGTCTTCTAGGAGCTCCCTCTGCGTGTCTTTGCAGCT
GTTTCAGCAGATTTGGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MVPQLLAGSMARVASKAIRQYMNLNQYQVDLGILIKFTGKIALGQRWVGQSLEYSCHIHRRQLSVAVPLEGGFALGRAFV
GFWCSGVLGAHDWLPVSGDTYKPEKHC

Sequences:

>Translated_107_residues
MVPQLLAGSMARVASKAIRQYMNLNQYQVDLGILIKFTGKIALGQRWVGQSLEYSCHIHRRQLSVAVPLEGGFALGRAFV
GFWCSGVLGAHDWLPVSGDTYKPEKHC
>Mature_107_residues
MVPQLLAGSMARVASKAIRQYMNLNQYQVDLGILIKFTGKIALGQRWVGQSLEYSCHIHRRQLSVAVPLEGGFALGRAFV
GFWCSGVLGAHDWLPVSGDTYKPEKHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11846; Mature: 11846

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPQLLAGSMARVASKAIRQYMNLNQYQVDLGILIKFTGKIALGQRWVGQSLEYSCHIHR
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEECCHHCCCCCCEEEEEEE
RQLSVAVPLEGGFALGRAFVGFWCSGVLGAHDWLPVSGDTYKPEKHC
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVPQLLAGSMARVASKAIRQYMNLNQYQVDLGILIKFTGKIALGQRWVGQSLEYSCHIHR
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEECCHHCCCCCCEEEEEEE
RQLSVAVPLEGGFALGRAFVGFWCSGVLGAHDWLPVSGDTYKPEKHC
EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA