| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is metA [H]
Identifier: 33863148
GI number: 33863148
Start: 959734
End: 960627
Strand: Direct
Name: metA [H]
Synonym: PMT0876
Alternate gene names: 33863148
Gene position: 959734-960627 (Clockwise)
Preceding gene: 33863147
Following gene: 33863150
Centisome position: 39.81
GC content: 50.67
Gene sequence:
>894_bases ATGGCGCTGATCCTGCCACGCAGTTATCACAAGATCGCCGCGGTGGAGAAGAACCGGATCTCATGGATCGAGCCGGAACT TGCGGAACGTCAGGACATCCGGCCATTAAGAATCGGAATCCTCAACATCATGCCCCTGGGCAAGCAGTATGAATTCAATC TGCTGCATCCCCTAGGGCTTTCACCTCTTCAGATCGAACCGATCTGGATAAGGCTAAGTAGCCATAGCTATAAAACATGG GACCTTGCTCATCTCGATAATCTCTATGTGAGCTGGGAGGAAGCAATGGAACCCAATCCTCTTGATGGTTTGATCATCAC TGGAGCACCAGTTGAGCATCTTCCATTTGAGGAGGTGAACTACTGGCCAGAGCTAGTAAAAATCATCGAACAGGCACGGC AGAACTGTGCAAACACGCTTGGCTTGTGCTGGGCTGGTTTTGCAATGGCCTATCTCGAAGGTGTCGATAAAAAATCATTT GCCAAAAAGTTGTTCGGGGTGTTCCCAATGCGCAGCTTGGTCCCCGGCCATGCCCTGATGGGCACTCAAGACGATCGATT TGTGTGTCCGCAGAGTCGCCATGCTGGGTTGCATGATGGCGCAATGGAAGCAGCACAACGACAGGGACGTCTACGTTTAC TTGCCCATGGTGAGAAGGTTGGCTACACAATCTTTGAGACCACCGATCAACGCCAACTGGTTCATCTTGGCCATCCGGAG TACAACGCGGGGCGCCTGTTAACAGAGATGGAACGTGATCAAGCGCGAGGTGATGTTCAGCCCCCTGAAAATTTTGATCC AGACAACCCTTTAACTCTATGGCGATCACATCGCAATCTACTGTTTCAACACTGGCTCTGGTTCTGCTATCAAAGAGTAA GCTTGCGTGACTAA
Upstream 100 bases:
>100_bases CCACAATGGTTAGGGTATCTGTTGGCCTTGAACACATCGAAGACATCAAGGCTGATTTTGAACAGGCCCTAGCGGCCATC AGTTGAGACTGGAGGCATCG
Downstream 100 bases:
>100_bases AATGCTGTCATAATGACTATGTATAGCAAACAGAATAACCCAAAAAGCCAGGAAATCTCTATCAATCAACCTCGAAAGCA CCATAGATCGAGGGGCTTTC
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MALILPRSYHKIAAVEKNRISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLSSHSYKTW DLAHLDNLYVSWEEAMEPNPLDGLIITGAPVEHLPFEEVNYWPELVKIIEQARQNCANTLGLCWAGFAMAYLEGVDKKSF AKKLFGVFPMRSLVPGHALMGTQDDRFVCPQSRHAGLHDGAMEAAQRQGRLRLLAHGEKVGYTIFETTDQRQLVHLGHPE YNAGRLLTEMERDQARGDVQPPENFDPDNPLTLWRSHRNLLFQHWLWFCYQRVSLRD
Sequences:
>Translated_297_residues MALILPRSYHKIAAVEKNRISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLSSHSYKTW DLAHLDNLYVSWEEAMEPNPLDGLIITGAPVEHLPFEEVNYWPELVKIIEQARQNCANTLGLCWAGFAMAYLEGVDKKSF AKKLFGVFPMRSLVPGHALMGTQDDRFVCPQSRHAGLHDGAMEAAQRQGRLRLLAHGEKVGYTIFETTDQRQLVHLGHPE YNAGRLLTEMERDQARGDVQPPENFDPDNPLTLWRSHRNLLFQHWLWFCYQRVSLRD >Mature_296_residues ALILPRSYHKIAAVEKNRISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGLSPLQIEPIWIRLSSHSYKTWD LAHLDNLYVSWEEAMEPNPLDGLIITGAPVEHLPFEEVNYWPELVKIIEQARQNCANTLGLCWAGFAMAYLEGVDKKSFA KKLFGVFPMRSLVPGHALMGTQDDRFVCPQSRHAGLHDGAMEAAQRQGRLRLLAHGEKVGYTIFETTDQRQLVHLGHPEY NAGRLLTEMERDQARGDVQPPENFDPDNPLTLWRSHRNLLFQHWLWFCYQRVSLRD
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=299, Percent_Identity=34.1137123745819, Blast_Score=160, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 34318; Mature: 34187
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILPRSYHKIAAVEKNRISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGL CEEECCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHEEEEEHEECCCCCCCEEEECCCCC SPLQIEPIWIRLSSHSYKTWDLAHLDNLYVSWEEAMEPNPLDGLIITGAPVEHLPFEEVN CCEEEEEEEEEEECCCCCEEEHHHHHHHEEEHHHHCCCCCCCCEEECCCCCCCCCHHHHH YWPELVKIIEQARQNCANTLGLCWAGFAMAYLEGVDKKSFAKKLFGVFPMRSLVPGHALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCEE GTQDDRFVCPQSRHAGLHDGAMEAAQRQGRLRLLAHGEKVGYTIFETTDQRQLVHLGHPE CCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEEEEECCCC YNAGRLLTEMERDQARGDVQPPENFDPDNPLTLWRSHRNLLFQHWLWFCYQRVSLRD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALILPRSYHKIAAVEKNRISWIEPELAERQDIRPLRIGILNIMPLGKQYEFNLLHPLGL EEECCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHEEEEEHEECCCCCCCEEEECCCCC SPLQIEPIWIRLSSHSYKTWDLAHLDNLYVSWEEAMEPNPLDGLIITGAPVEHLPFEEVN CCEEEEEEEEEEECCCCCEEEHHHHHHHEEEHHHHCCCCCCCCEEECCCCCCCCCHHHHH YWPELVKIIEQARQNCANTLGLCWAGFAMAYLEGVDKKSFAKKLFGVFPMRSLVPGHALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCEE GTQDDRFVCPQSRHAGLHDGAMEAAQRQGRLRLLAHGEKVGYTIFETTDQRQLVHLGHPE CCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEEEEECCCC YNAGRLLTEMERDQARGDVQPPENFDPDNPLTLWRSHRNLLFQHWLWFCYQRVSLRD CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]