| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863134
Identifier: 33863134
GI number: 33863134
Start: 941743
End: 942741
Strand: Reverse
Name: 33863134
Synonym: PMT0862
Alternate gene names: NA
Gene position: 942741-941743 (Counterclockwise)
Preceding gene: 33863135
Following gene: 33863132
Centisome position: 39.1
GC content: 49.55
Gene sequence:
>999_bases ATGATTTCCGTGTTGCCTTCTAACGACACATCAGCAACTGCGTTTCGATCTGAGGTTTTCCCTGAGCTGCATCGGGACAA CCTACGTACTTTGCAGGTCAACCTTGGTTACCGATGCAACCAGAGCTGTGCCCACTGCCATGTGAATGCAGGGCCGACCC GTCTGGAAATGATGGATCCCCAAACTATGGCCTTGATACCAAAGGTGTTGGATCAATACCAGCTGGAATGTCTTGACCTC ACCGGTGGCGCTCCCGAGCTTCACCCAGGATTTAAGGATTTGGTCATTCAGGCCAGCTGTTTGGGTGTGGAGGTTATCGA CCGTTGCAACCTAACCATCCTCACTGAGCCAGGCCAGGAAAACTTGGCGGCTTTTCTCGCCAAACATCGTGTCACTGTGG TGGCTTCTCTGCCTTGTTACGAGGCGGAGAATGTAGACCAACAACGTGGCAAAGGAGTGTTTGAACGCAGCCTTATTGGA TTACGTCAGTTGAATCAACTTGGTTATGGGAAAAACGATGAGCAACTAATTCTCAACTTGATTTTTAACCCCCAGGGCCC TCAGCTGCCTCCTCCTCAAGCTCAACTAGAAGAGGCCTATCGTAAAGAGCTGAAACAACGTTATGGCATCGAATTCACCA GGTTATTCACGATAGCGAACATGCCGATTCAACGTTTCGCTACACAGTTGACAATGTCCGGCCAGCGAGAGAGTTATCAG CAGCTTTTAGAAGGTGCTCATAATCCCGATAATCTAAAAACGGTCATGTGCCGAAGCTTGATCAGTGTGAATTGGCAGGG CCAGCTTTTTGACTGTGATTTTAACCAGCAACTGAGTCTTCACCTTAAGGGGCCTGTTCAACACCTCAGGGACTTGCTGG ATGTCGAAATTCAATGGCCTGGTCAACCAATCACTGTTGGACCTCATTGTTTTGGTTGCACTGCAGGCAATGGATCCAGT TGTGGCGGCGCCCTTCAATCTGAGGGAGAGGTCGGTTAA
Upstream 100 bases:
>100_bases GTTCTGTTTGCAAAGAATCTTCAGTTTGTTTCGACATCAGCAGTAATAACTAACTAAGTGGTTTGTTTGCCATTGGCCAC GTCAGGATGATTGCACTCAA
Downstream 100 bases:
>100_bases TCATTCAAGGCCCTGTGATCAAAGCTGATGATTAGCGCTCGATAGATTTGCTGCCTGAATTTCTTATAAGGGAACCTTGC AACGTCTTGATCACGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; L-Asparaginase II; Radical SAM Superfamily Protein; Radical SAM Family Protein; Fe-S Oxidoreductases; NifB/MoaA Family Fe-S Oxidoreductase; Fe-S Oxidoreductase Of MoaA/NifB/PqqE Family
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MISVLPSNDTSATAFRSEVFPELHRDNLRTLQVNLGYRCNQSCAHCHVNAGPTRLEMMDPQTMALIPKVLDQYQLECLDL TGGAPELHPGFKDLVIQASCLGVEVIDRCNLTILTEPGQENLAAFLAKHRVTVVASLPCYEAENVDQQRGKGVFERSLIG LRQLNQLGYGKNDEQLILNLIFNPQGPQLPPPQAQLEEAYRKELKQRYGIEFTRLFTIANMPIQRFATQLTMSGQRESYQ QLLEGAHNPDNLKTVMCRSLISVNWQGQLFDCDFNQQLSLHLKGPVQHLRDLLDVEIQWPGQPITVGPHCFGCTAGNGSS CGGALQSEGEVG
Sequences:
>Translated_332_residues MISVLPSNDTSATAFRSEVFPELHRDNLRTLQVNLGYRCNQSCAHCHVNAGPTRLEMMDPQTMALIPKVLDQYQLECLDL TGGAPELHPGFKDLVIQASCLGVEVIDRCNLTILTEPGQENLAAFLAKHRVTVVASLPCYEAENVDQQRGKGVFERSLIG LRQLNQLGYGKNDEQLILNLIFNPQGPQLPPPQAQLEEAYRKELKQRYGIEFTRLFTIANMPIQRFATQLTMSGQRESYQ QLLEGAHNPDNLKTVMCRSLISVNWQGQLFDCDFNQQLSLHLKGPVQHLRDLLDVEIQWPGQPITVGPHCFGCTAGNGSS CGGALQSEGEVG >Mature_332_residues MISVLPSNDTSATAFRSEVFPELHRDNLRTLQVNLGYRCNQSCAHCHVNAGPTRLEMMDPQTMALIPKVLDQYQLECLDL TGGAPELHPGFKDLVIQASCLGVEVIDRCNLTILTEPGQENLAAFLAKHRVTVVASLPCYEAENVDQQRGKGVFERSLIG LRQLNQLGYGKNDEQLILNLIFNPQGPQLPPPQAQLEEAYRKELKQRYGIEFTRLFTIANMPIQRFATQLTMSGQRESYQ QLLEGAHNPDNLKTVMCRSLISVNWQGQLFDCDFNQQLSLHLKGPVQHLRDLLDVEIQWPGQPITVGPHCFGCTAGNGSS CGGALQSEGEVG
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36897; Mature: 36897
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVLPSNDTSATAFRSEVFPELHRDNLRTLQVNLGYRCNQSCAHCHVNAGPTRLEMMDP CEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCCCCEEEEECC QTMALIPKVLDQYQLECLDLTGGAPELHPGFKDLVIQASCLGVEVIDRCNLTILTEPGQE HHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEECCCHH NLAAFLAKHRVTVVASLPCYEAENVDQQRGKGVFERSLIGLRQLNQLGYGKNDEQLILNL HHHHHHHHCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE IFNPQGPQLPPPQAQLEEAYRKELKQRYGIEFTRLFTIANMPIQRFATQLTMSGQRESYQ EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHCCCCHHHHH QLLEGAHNPDNLKTVMCRSLISVNWQGQLFDCDFNQQLSLHLKGPVQHLRDLLDVEIQWP HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHHHHHHHHCEEEECC GQPITVGPHCFGCTAGNGSSCGGALQSEGEVG CCCEEECCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISVLPSNDTSATAFRSEVFPELHRDNLRTLQVNLGYRCNQSCAHCHVNAGPTRLEMMDP CEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCCCCEEEEECC QTMALIPKVLDQYQLECLDLTGGAPELHPGFKDLVIQASCLGVEVIDRCNLTILTEPGQE HHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCEEEEECCCHH NLAAFLAKHRVTVVASLPCYEAENVDQQRGKGVFERSLIGLRQLNQLGYGKNDEQLILNL HHHHHHHHCCEEEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEE IFNPQGPQLPPPQAQLEEAYRKELKQRYGIEFTRLFTIANMPIQRFATQLTMSGQRESYQ EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHCCCCHHHHH QLLEGAHNPDNLKTVMCRSLISVNWQGQLFDCDFNQQLSLHLKGPVQHLRDLLDVEIQWP HHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCHHHHHHHHHCEEEECC GQPITVGPHCFGCTAGNGSSCGGALQSEGEVG CCCEEECCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA