| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863132
Identifier: 33863132
GI number: 33863132
Start: 941008
End: 941394
Strand: Reverse
Name: 33863132
Synonym: PMT0860
Alternate gene names: NA
Gene position: 941394-941008 (Counterclockwise)
Preceding gene: 33863134
Following gene: 33863131
Centisome position: 39.05
GC content: 48.84
Gene sequence:
>387_bases TTGTGGAGTTTTGGTGCAGTCGATGGGCCTGATCTAGCTCTCGCTCGCCAAAAGCGAGCGAGAGGATTTTGTGGTGCATC CTTCAATCTGGATGCATCATGGATAGTGGAAATAATGGAGCTCATGGGCCGATCAGCCTCAACTACATTAAGTGGATCGC TACTGTTGATTGCTGCAACGACTGGATTGACAGTTTTAATGAGCGAAGTAGGGATCAACGCTGCTGAAACATCAGCGACT GAACCGAAGCAGGCGATGTTTAGAACTCAAGCTGAGGCAGAAGCTGCAGCTCCACAATTTGGTTGTAAGGGAGCCCATCA GATGGGTCAGATGTGGATGGTCTGTGACAAGCACGGCATTCAAATGGAGTCTCAACACAATCCATGA
Upstream 100 bases:
>100_bases ACAGCCAAAACCGCTTCAAAGGCCTCTTCAAAAACCAATGGTTTGAACACGACGATCTCTTGCCACCAGTCAGCAAACGG TGCGTCCATAGCCTCGACGC
Downstream 100 bases:
>100_bases ACACTGCTGATAAAACTGGCGATGACAAAGCATCAGCACACTGCGGGAGCAAACCGAAAAAGCTGGCTATTGGGATAGCT CCCTTAGGCACAATTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MWSFGAVDGPDLALARQKRARGFCGASFNLDASWIVEIMELMGRSASTTLSGSLLLIAATTGLTVLMSEVGINAAETSAT EPKQAMFRTQAEAEAAAPQFGCKGAHQMGQMWMVCDKHGIQMESQHNP
Sequences:
>Translated_128_residues MWSFGAVDGPDLALARQKRARGFCGASFNLDASWIVEIMELMGRSASTTLSGSLLLIAATTGLTVLMSEVGINAAETSAT EPKQAMFRTQAEAEAAAPQFGCKGAHQMGQMWMVCDKHGIQMESQHNP >Mature_128_residues MWSFGAVDGPDLALARQKRARGFCGASFNLDASWIVEIMELMGRSASTTLSGSLLLIAATTGLTVLMSEVGINAAETSAT EPKQAMFRTQAEAEAAAPQFGCKGAHQMGQMWMVCDKHGIQMESQHNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13665; Mature: 13665
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSFGAVDGPDLALARQKRARGFCGASFNLDASWIVEIMELMGRSASTTLSGSLLLIAAT CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEH TGLTVLMSEVGINAAETSATEPKQAMFRTQAEAEAAAPQFGCKGAHQMGQMWMVCDKHGI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCCC QMESQHNP CCCCCCCC >Mature Secondary Structure MWSFGAVDGPDLALARQKRARGFCGASFNLDASWIVEIMELMGRSASTTLSGSLLLIAAT CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEH TGLTVLMSEVGINAAETSATEPKQAMFRTQAEAEAAAPQFGCKGAHQMGQMWMVCDKHGI HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCCC QMESQHNP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA