| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863110
Identifier: 33863110
GI number: 33863110
Start: 914146
End: 914457
Strand: Direct
Name: 33863110
Synonym: PMT0838
Alternate gene names: NA
Gene position: 914146-914457 (Clockwise)
Preceding gene: 33863108
Following gene: 33863112
Centisome position: 37.92
GC content: 49.68
Gene sequence:
>312_bases ATGCTGCTTGCAGAAGAGACAATTGAATTATCTATTCCCTTCTTTCAGATGTCAGAAGAGCAACTCAAAGCGTTCCTCGA AAAAGTCAAAGCAGACACCAGCCTGCAGGAGAAGCTGAAAGCAGCTGCTGATTCAGACGCAGTTCTTGTGATTGCGAAAG ACGCTGGCTTTAGCATCTCTGCTGATGACTTGAAGAACGCTCAATCAGAGATTTCTGAAGAAGAGCTTGAAAGCGTCGCT GGGGGTGCCGGGGTAACTGAAGCCACAATTGACGCTGGGGGCGGCTGCACATTCAATCCCTGCTGCCGCTGA
Upstream 100 bases:
>100_bases GGCAGAAGAAGGTCTTGGGTAGAGCGGGGAAATCCTTGGCGATGAGCTGGCTGGCTATGGGAGTGGCTGAAGCAACAACC TTCTTCAACCAAGGCTGACA
Downstream 100 bases:
>100_bases GAACTTTAAGAGCTGTGATGGAAATTACACCCTCAAAAGCCCCTGAATTGACAGGGACTTTCTATTTCATCAACGACTTC CATATTCGCTTTAAACGGCA
Product: SAP domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLLAEETIELSIPFFQMSEEQLKAFLEKVKADTSLQEKLKAAADSDAVLVIAKDAGFSISADDLKNAQSEISEEELESVA GGAGVTEATIDAGGGCTFNPCCR
Sequences:
>Translated_103_residues MLLAEETIELSIPFFQMSEEQLKAFLEKVKADTSLQEKLKAAADSDAVLVIAKDAGFSISADDLKNAQSEISEEELESVA GGAGVTEATIDAGGGCTFNPCCR >Mature_103_residues MLLAEETIELSIPFFQMSEEQLKAFLEKVKADTSLQEKLKAAADSDAVLVIAKDAGFSISADDLKNAQSEISEEELESVA GGAGVTEATIDAGGGCTFNPCCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10859; Mature: 10859
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAEETIELSIPFFQMSEEQLKAFLEKVKADTSLQEKLKAAADSDAVLVIAKDAGFSIS CCCCCCCEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEC ADDLKNAQSEISEEELESVAGGAGVTEATIDAGGGCTFNPCCR HHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MLLAEETIELSIPFFQMSEEQLKAFLEKVKADTSLQEKLKAAADSDAVLVIAKDAGFSIS CCCCCCCEEEECCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCEEC ADDLKNAQSEISEEELESVAGGAGVTEATIDAGGGCTFNPCCR HHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA