| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863108
Identifier: 33863108
GI number: 33863108
Start: 913138
End: 913383
Strand: Direct
Name: 33863108
Synonym: PMT0836
Alternate gene names: NA
Gene position: 913138-913383 (Clockwise)
Preceding gene: 33863104
Following gene: 33863110
Centisome position: 37.88
GC content: 48.78
Gene sequence:
>246_bases ATGTCAGAAGAACAACTGAAGGCATTCATCGCCAAGGTTCAAGGCGATACTTCACTGCAGGAACAGCTCAAAGCAGAAGG TGCTGATGTTGTAGCCATTGCCAAAGCTGCTGGGTTCTCGATTACCACAGAAGACCTAAACACTCATCGTCAAACCCTGT CTGATAGAGAGCTTGAGGGTGTGGCTGGGGGCACTACTGCTTTCACTGGGGTAGACACTGAAAGCATTGCATTTTGCTGC AGTTGA
Upstream 100 bases:
>100_bases ATTGCAGCCTGCTGTAGTGAAAGCTTCATACAATTCAATCGATGCTTAAACTCATCAGCCTTAGATTGGTCTATAGATAA AGAATAGACAACTACATCTG
Downstream 100 bases:
>100_bases TTTAACCAGCCTACACACTCAAAGCCCTTGCATTAGCAGGGGCTTTTTATTTCCTCAACGACTTCCATATTCGCTTAAAA TGGCATCCGATACCTGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSEEQLKAFIAKVQGDTSLQEQLKAEGADVVAIAKAAGFSITTEDLNTHRQTLSDRELEGVAGGTTAFTGVDTESIAFCC S
Sequences:
>Translated_81_residues MSEEQLKAFIAKVQGDTSLQEQLKAEGADVVAIAKAAGFSITTEDLNTHRQTLSDRELEGVAGGTTAFTGVDTESIAFCC S >Mature_80_residues SEEQLKAFIAKVQGDTSLQEQLKAEGADVVAIAKAAGFSITTEDLNTHRQTLSDRELEGVAGGTTAFTGVDTESIAFCCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8510; Mature: 8379
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEQLKAFIAKVQGDTSLQEQLKAEGADVVAIAKAAGFSITTEDLNTHRQTLSDRELEG CCHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCC VAGGTTAFTGVDTESIAFCCS CCCCCCEECCCCCCCEEEECC >Mature Secondary Structure SEEQLKAFIAKVQGDTSLQEQLKAEGADVVAIAKAAGFSITTEDLNTHRQTLSDRELEG CHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCC VAGGTTAFTGVDTESIAFCCS CCCCCCEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA