| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863093
Identifier: 33863093
GI number: 33863093
Start: 898159
End: 898833
Strand: Reverse
Name: 33863093
Synonym: PMT0821
Alternate gene names: NA
Gene position: 898833-898159 (Counterclockwise)
Preceding gene: 33863094
Following gene: 33863090
Centisome position: 37.28
GC content: 44.74
Gene sequence:
>675_bases GTGATCGCTAACGCTTCCCCTATTGTTTTGGCTCCTGGTAGTGATTGTCGAGAACTATTTCAGGCGGCTTATGAGAATCG CTACACCTGGGATCCGGTCTTTTCTGGTTATCGGGGTCGGTGTCTCTGGGTCAAGGATGATCGTGTCGTGGAAGGGAAGT TTGAGTTGGGAGCAGATCTTAAGGCCCATATTGATGGTATAGAAGATGAATTGATCGCTAAGGCTGTCTCTTCCCAGCTT TGGGAAGTTGCCATACATCGAGTACGACGCAGTTTTGAAAAGACCCATGGTGAAAACACTTTTACCGCAGGTGAAAACGA TGAGGTTGGCTTAGAAGTGATCGTTGGAGGTAAAAATCTTGGTGATCGTTATCGGATCAAAAATGATGTGGTGACGATGG TTCATCGCCATATTCACGGAACAGTGGTGACCATTTTTACAAAAAGTACGACGGATACAGGTTATGGCTACCTAAGTCAT ACTTACAGCAGTCAATACCACGACCCAAAAACAAATGAGCCTACCAGTGGGTTAAGTCAGTTCACTGATACTTTTGTGCC CTTGGCTGATGATGGCTTGTGGGTATTGAGTGAAAGGTTAGTGAAAAAAGATGCTTTTGCTGGAATGGCTGCTGAACAGC ATTTGTTTAAGTTCGTAGATCTTGAGCAGCTTTAA
Upstream 100 bases:
>100_bases AGGGAATTACGGCACTTCAACAACAGTCATTATCCGTAGCGGCGCTTCAAGACATCCATGTTTGATCTCCCATTAGGCTT GCTCAACTGAAATTCTTGCC
Downstream 100 bases:
>100_bases AATAATTGATAATGGTTGCCAATTTTTTTGAGATTAATATAGGTGCTCTTTGCTTAATTGTCAGTGATGACAGCATTGAT TTTATTGGAAAAGCTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MIANASPIVLAPGSDCRELFQAAYENRYTWDPVFSGYRGRCLWVKDDRVVEGKFELGADLKAHIDGIEDELIAKAVSSQL WEVAIHRVRRSFEKTHGENTFTAGENDEVGLEVIVGGKNLGDRYRIKNDVVTMVHRHIHGTVVTIFTKSTTDTGYGYLSH TYSSQYHDPKTNEPTSGLSQFTDTFVPLADDGLWVLSERLVKKDAFAGMAAEQHLFKFVDLEQL
Sequences:
>Translated_224_residues MIANASPIVLAPGSDCRELFQAAYENRYTWDPVFSGYRGRCLWVKDDRVVEGKFELGADLKAHIDGIEDELIAKAVSSQL WEVAIHRVRRSFEKTHGENTFTAGENDEVGLEVIVGGKNLGDRYRIKNDVVTMVHRHIHGTVVTIFTKSTTDTGYGYLSH TYSSQYHDPKTNEPTSGLSQFTDTFVPLADDGLWVLSERLVKKDAFAGMAAEQHLFKFVDLEQL >Mature_224_residues MIANASPIVLAPGSDCRELFQAAYENRYTWDPVFSGYRGRCLWVKDDRVVEGKFELGADLKAHIDGIEDELIAKAVSSQL WEVAIHRVRRSFEKTHGENTFTAGENDEVGLEVIVGGKNLGDRYRIKNDVVTMVHRHIHGTVVTIFTKSTTDTGYGYLSH TYSSQYHDPKTNEPTSGLSQFTDTFVPLADDGLWVLSERLVKKDAFAGMAAEQHLFKFVDLEQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25171; Mature: 25171
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIANASPIVLAPGSDCRELFQAAYENRYTWDPVFSGYRGRCLWVKDDRVVEGKFELGADL CCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCEEEECCHHCCCCH KAHIDGIEDELIAKAVSSQLWEVAIHRVRRSFEKTHGENTFTAGENDEVGLEVIVGGKNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC GDRYRIKNDVVTMVHRHIHGTVVTIFTKSTTDTGYGYLSHTYSSQYHDPKTNEPTSGLSQ CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHH FTDTFVPLADDGLWVLSERLVKKDAFAGMAAEQHLFKFVDLEQL HHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIANASPIVLAPGSDCRELFQAAYENRYTWDPVFSGYRGRCLWVKDDRVVEGKFELGADL CCCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEECCEEEECCHHCCCCH KAHIDGIEDELIAKAVSSQLWEVAIHRVRRSFEKTHGENTFTAGENDEVGLEVIVGGKNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC GDRYRIKNDVVTMVHRHIHGTVVTIFTKSTTDTGYGYLSHTYSSQYHDPKTNEPTSGLSQ CCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHH FTDTFVPLADDGLWVLSERLVKKDAFAGMAAEQHLFKFVDLEQL HHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA