| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863090
Identifier: 33863090
GI number: 33863090
Start: 895222
End: 895443
Strand: Reverse
Name: 33863090
Synonym: PMT0818
Alternate gene names: NA
Gene position: 895443-895222 (Counterclockwise)
Preceding gene: 33863093
Following gene: 33863089
Centisome position: 37.14
GC content: 53.6
Gene sequence:
>222_bases TTGCGTGAACGCTCTGCTTATTCAATGAAGTTGGATCAATTTCTTAAATGGCAGGGCTGGGTGGCCACTGGAGGCGAGGC GAAACAGCTGATCCAGTCAGGGCAGGTGTTTGTCAATGGCTCTGTTGAAACAAGGCGTGGCCACCATTTGAGTTCAGGCA ACCGGGTTCGACTGGGCACAGATGAGGCGGTCTTTGTCGGCAATGCTTCGACAGGGCCGTAA
Upstream 100 bases:
>100_bases GCACACACCTCCCCAGATCAGCCTGCGCAGGTGAGGGCGTAAGAGGGGAAGCAGTCTGCGGAAGCCGGCTTCGGAGGAGG AAAACATCGAGTCACACTAG
Downstream 100 bases:
>100_bases GTTAGCCCCTGCGGAACTTCAGAGGACCCGAGCGTGCGTAAACCCGTGATCGCTGGCAACTGGAAGATGCATATGACCTG TGCTCAGGCACGGGAGTACA
Product: S4 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MRERSAYSMKLDQFLKWQGWVATGGEAKQLIQSGQVFVNGSVETRRGHHLSSGNRVRLGTDEAVFVGNASTGP
Sequences:
>Translated_73_residues MRERSAYSMKLDQFLKWQGWVATGGEAKQLIQSGQVFVNGSVETRRGHHLSSGNRVRLGTDEAVFVGNASTGP >Mature_73_residues MRERSAYSMKLDQFLKWQGWVATGGEAKQLIQSGQVFVNGSVETRRGHHLSSGNRVRLGTDEAVFVGNASTGP
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7993; Mature: 7993
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERSAYSMKLDQFLKWQGWVATGGEAKQLIQSGQVFVNGSVETRRGHHLSSGNRVRLGT CCCCCCCCCCHHHHHCCCCEEECCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECC DEAVFVGNASTGP CCEEEEECCCCCC >Mature Secondary Structure MRERSAYSMKLDQFLKWQGWVATGGEAKQLIQSGQVFVNGSVETRRGHHLSSGNRVRLGT CCCCCCCCCCHHHHHCCCCEEECCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEECC DEAVFVGNASTGP CCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA