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The map label for this gene is 33863068

Identifier: 33863068

GI number: 33863068

Start: 870714

End: 871166

Strand: Reverse

Name: 33863068

Synonym: PMT0796

Alternate gene names: NA

Gene position: 871166-870714 (Counterclockwise)

Preceding gene: 33863069

Following gene: 33863064

Centisome position: 36.13

GC content: 43.93

Gene sequence:

>453_bases
ATGCCTAGTAAGCCTCGAGATCGGCTCGGAGAAGTTTATGGTCGCCTAACTGTTGTTCGTGCGTCCGATCGCAGAACCGC
AGCAGGCAATTGCTATTGGTGGTGCCGTTGTAGCTGCGGCAATGAACGTGAAGTTCCGAGTGACTCTTTATCTCATCGGT
TGAGAAAGAAAAAGAATATTACCGAATGCATTGAATGTTCTCGTGAACTCACAACTGAGGCTGTTTGTGATAAGAATGAT
CGTGAGGAGAACTTAAGAAGAAAGCAGGCGCAAATTAATCGAAAGAATCTTGTCGGCAAGGTTCCAGATCAATGGCTAAA
ACTTCCCTTAACTGATGCTCATGCTAGGGAAATTGGAGTAAAGAAATTTTTCAGAGGCACTTATTGTCTTAATGGTCACC
TTTCTCCTTATCGAATCAATGGTGGCTGCTTGGCTTGTAATAGAGCTGAATAG

Upstream 100 bases:

>100_bases
AGGTGTATTGACTATATTCCATCGATATGTCAACCTATTAAATTGCTAGCAGATCCTTTGACCAATGATGTTTGCTAATG
CATGACTTGAGAAGTTACTG

Downstream 100 bases:

>100_bases
GATGCCTATTAACCAATATTCCATGTACTCTGATTAGTATTGCTTACCAAGCAGCCATAACATTCATGCCCGTAGCCCAT
ATCCCCATGCCTACCAGGCA

Product: early protein (E6)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPSKPRDRLGEVYGRLTVVRASDRRTAAGNCYWWCRCSCGNEREVPSDSLSHRLRKKKNITECIECSRELTTEAVCDKND
REENLRRKQAQINRKNLVGKVPDQWLKLPLTDAHAREIGVKKFFRGTYCLNGHLSPYRINGGCLACNRAE

Sequences:

>Translated_150_residues
MPSKPRDRLGEVYGRLTVVRASDRRTAAGNCYWWCRCSCGNEREVPSDSLSHRLRKKKNITECIECSRELTTEAVCDKND
REENLRRKQAQINRKNLVGKVPDQWLKLPLTDAHAREIGVKKFFRGTYCLNGHLSPYRINGGCLACNRAE
>Mature_149_residues
PSKPRDRLGEVYGRLTVVRASDRRTAAGNCYWWCRCSCGNEREVPSDSLSHRLRKKKNITECIECSRELTTEAVCDKNDR
EENLRRKQAQINRKNLVGKVPDQWLKLPLTDAHAREIGVKKFFRGTYCLNGHLSPYRINGGCLACNRAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17254; Mature: 17123

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKPRDRLGEVYGRLTVVRASDRRTAAGNCYWWCRCSCGNEREVPSDSLSHRLRKKKNI
CCCCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCH
TECIECSRELTTEAVCDKNDREENLRRKQAQINRKNLVGKVPDQWLKLPLTDAHAREIGV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHH
KKFFRGTYCLNGHLSPYRINGGCLACNRAE
HHHHCCCEEECCCCCEEEECCCEEECCCCC
>Mature Secondary Structure 
PSKPRDRLGEVYGRLTVVRASDRRTAAGNCYWWCRCSCGNEREVPSDSLSHRLRKKKNI
CCCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCH
TECIECSRELTTEAVCDKNDREENLRRKQAQINRKNLVGKVPDQWLKLPLTDAHAREIGV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHH
KKFFRGTYCLNGHLSPYRINGGCLACNRAE
HHHHCCCEEECCCCCEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA