| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is pheT
Identifier: 33863010
GI number: 33863010
Start: 804474
End: 806921
Strand: Reverse
Name: pheT
Synonym: PMT0738
Alternate gene names: 33863010
Gene position: 806921-804474 (Counterclockwise)
Preceding gene: 33863014
Following gene: 33863002
Centisome position: 33.47
GC content: 49.22
Gene sequence:
>2448_bases ATGCGGGTTCCTCTCTCCTGGCTGCAGGATCTAGTACAGCTGAATGAGACCGTCGAGATCCTCGCCGAAGGCTTATCGAT GGCTGGATTTGAGGTTGAGGCTATTGATGATTTAGCTAGTCATGCACAAGGCGTGGTCGTTGGGTTGGTGAAAGACCATC AACCCCACCCCAATGCCGACAAACTCAGTGTCTGTCAGGTGGATGTCGGGTCGGGCGAAGGTCTTCAGATCGTCTGTGGG GCTCCAAATGTTCGGATTGGTATACACGTACCTGTTGCCATGGTTGGAGCAACCCTCCCTGCTGTCGGAATCAAGATCAA GGCCAGTGAGCTTCGGGGGGTTCCAAGTCAAGGAATGATCTGCTCACTCGCGGAATTAGGGCTGGAATCAAATGGTAATG GAATCGCCATCCTTGAAGAGATCGCTGAAAACGTTCCAGACCTCGGCCAGCCTGTAGGCCCTCTGCTCGGACTCGATGAC ACAGTGCTTGAGTTGGCAATCACAGCCAATCGCCCCGATGGAATGTCGATGGTTGGTATCGCAAGAGAAGTTGCTGCTTT AACAGGCGCAAGCCTGCAGCTTCCGCAACTTGATATGGCACCAATCCATAAGTCTTTTGAGCCTGATTCCACCAGCTCTG CGTCCATGCTGAAGGGTGGTCTTTATGGCTTAACCGCCTTAGAGAATGTGGATGGTGAATTAACTTCGCCAGCCTGGTTA AAGCAACGCTTGGAGCGTTCAGGATGCAAATCAGTGAATGGTGTCGTCGATATTACAAATCTCGTGATGTTGGAGCAAGG TCAGCCATTGCATGCTTTTGATATTGATGCTCTTGAAATGATCACAGGTCAAACAGTTTCCGCAGAATCTTTTGGCCTTC GACAAGCAAGAAATAATGAACTTTTTAATGGACTAGATGGACATCAACTTCAACTTAACGAAAATTGCCAGATCGTCACC TGCCATGACATTCCTATAGCGCTTGCGGGTGTTATGGGTAGTGCTGAAAGCGGTGTGTCTGCCAAGACAAGGCGAGTATG GCTGGAATCCGCAATGTTTACCCCAACGGCCGTGAGAACTACGTGCCGAGCTGTTGGCTTAAGGACCGATGCAAGCAGTC GCTTTGAGAAAGGGTTGCCTGTTGAAATGACTTTGGCATCAGCCCGTCGAGCTGTGACACTAATGGAGGAACATTTAGGT ATTAAATCAAATGGATGTTGGGTATATGGTGAGTCCCCAAAATCAGCTGAGCCTGTAAAACTTCGCCGCGAAGCTATCCA TCGCTTACTCGGACCAATAGGTGTTGAGAATGACAACAGATACCTAGAAGACGACATTATCGAGACTTCGCTGCTCGCTC TCGGATGCGAGTTGTCTCCTTATAACGAAGGGTGGTTGGTCATAGTTCCACCATCACGACGTAGAGATCTCTCGCGAGAG GTTGATTTGATCGAAGAGGTATCTCGCCTTGTTGGCTTTGATCGTTTTGAGGCCAACCTGCCAGATCCACTTGAACCTGG TGGGCTAACGACTGCTCAGACAGCTGAACGCCTATTGAGGCAGATGTTGTGCGGAGCAGGATTGCAGGAAGTCACGACCT TGTCGTTAGTGGGTGCTGATAGTGATGAACCACAACGAATTGCAATTAGCAACCCTTTATTGGCTGAGACCAGCCACCTG CGTACCAATCTTTGGGAGGAGCATCTACGTATTTGCCAACGCAACCTCCAGTCATCGCAGCCTGGTTGTTGGTTATATGA AATAGGCAATGTCTATACAGTCACTGACGAGCTCATCAACCAACGCGCTGTTCTTGGTGGCGTGATCTGTGCAGAGCGAA GCTTTGAACGATGGAGTACAAGCGGCAAGATCAAGTCAATGACATATCACCAGGCACGCGGTCAGCTTTCCCAAGTCTTT CAAGGGTTGAAGTTGGACATTAACGACCGTCCACTCAAGGACAATCATTCACTTCATCCTGGGCGGTCTGCAGAGTTATT TGTCGAAGGCAAACTGCTCGGGGATTTTGGGCAGCTTCATCCAGCACTATCGGAACGTCTTGATCTACCTGAAGCAACCT ATCTATTCGCTTTGGACTTGCAGTGCATCATCCAAGCTGCGACACGATCTAATCGATGGAACCCTACCTTCCGACCATTC CCGACAGTTCCAGCAATGGAACTTGATTTAGCTGTGATCGTTTCAAAGGAATGTAGTTGTTCAGATTTGATCCAGGCCAT CAGAAAAGCTGGTAAACCGCTTCTAGAGCATGTAGAGCTGATTGATCGTTTTGAGGGTGGACAGCTTGATCCTTACTCTT GCAGTCAAGCGTTCAGGTTGCGCTATCGGAGTAAAGACAGGACTCTTAGTGAAGACAAGGTCAACCCGATTCACGAGAAG GTACGTCAAGCACTTGTCAAGCAGTTTTCTGCAGAGCTTAGGAGCTAA
Upstream 100 bases:
>100_bases GAAGCGTAGTGAAGAACTAAGATCCTACAGGGCAGCCTCACATGACATGACGCCGTCGTTCTCTTGCTTCGTAAGATCTT TGGCTGCATCTAGCTGATCC
Downstream 100 bases:
>100_bases TACGAGTTAACAGTGCCAGACATTCGATATGCATTGTTTGTGGAAAGAAATCAATGGGTTGTAATTCATCAATCTGATAG GGTCCATTTGGTACGATCAA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNADKLSVCQVDVGSGEGLQIVCG APNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMICSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDD TVLELAITANRPDGMSMVGIAREVAALTGASLQLPQLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGELTSPAWL KQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLRQARNNELFNGLDGHQLQLNENCQIVT CHDIPIALAGVMGSAESGVSAKTRRVWLESAMFTPTAVRTTCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHLG IKSNGCWVYGESPKSAEPVKLRREAIHRLLGPIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPSRRRDLSRE VDLIEEVSRLVGFDRFEANLPDPLEPGGLTTAQTAERLLRQMLCGAGLQEVTTLSLVGADSDEPQRIAISNPLLAETSHL RTNLWEEHLRICQRNLQSSQPGCWLYEIGNVYTVTDELINQRAVLGGVICAERSFERWSTSGKIKSMTYHQARGQLSQVF QGLKLDINDRPLKDNHSLHPGRSAELFVEGKLLGDFGQLHPALSERLDLPEATYLFALDLQCIIQAATRSNRWNPTFRPF PTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLLEHVELIDRFEGGQLDPYSCSQAFRLRYRSKDRTLSEDKVNPIHEK VRQALVKQFSAELRS
Sequences:
>Translated_815_residues MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNADKLSVCQVDVGSGEGLQIVCG APNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMICSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDD TVLELAITANRPDGMSMVGIAREVAALTGASLQLPQLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGELTSPAWL KQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLRQARNNELFNGLDGHQLQLNENCQIVT CHDIPIALAGVMGSAESGVSAKTRRVWLESAMFTPTAVRTTCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHLG IKSNGCWVYGESPKSAEPVKLRREAIHRLLGPIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPSRRRDLSRE VDLIEEVSRLVGFDRFEANLPDPLEPGGLTTAQTAERLLRQMLCGAGLQEVTTLSLVGADSDEPQRIAISNPLLAETSHL RTNLWEEHLRICQRNLQSSQPGCWLYEIGNVYTVTDELINQRAVLGGVICAERSFERWSTSGKIKSMTYHQARGQLSQVF QGLKLDINDRPLKDNHSLHPGRSAELFVEGKLLGDFGQLHPALSERLDLPEATYLFALDLQCIIQAATRSNRWNPTFRPF PTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLLEHVELIDRFEGGQLDPYSCSQAFRLRYRSKDRTLSEDKVNPIHEK VRQALVKQFSAELRS >Mature_815_residues MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNADKLSVCQVDVGSGEGLQIVCG APNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMICSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDD TVLELAITANRPDGMSMVGIAREVAALTGASLQLPQLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGELTSPAWL KQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLRQARNNELFNGLDGHQLQLNENCQIVT CHDIPIALAGVMGSAESGVSAKTRRVWLESAMFTPTAVRTTCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHLG IKSNGCWVYGESPKSAEPVKLRREAIHRLLGPIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPSRRRDLSRE VDLIEEVSRLVGFDRFEANLPDPLEPGGLTTAQTAERLLRQMLCGAGLQEVTTLSLVGADSDEPQRIAISNPLLAETSHL RTNLWEEHLRICQRNLQSSQPGCWLYEIGNVYTVTDELINQRAVLGGVICAERSFERWSTSGKIKSMTYHQARGQLSQVF QGLKLDINDRPLKDNHSLHPGRSAELFVEGKLLGDFGQLHPALSERLDLPEATYLFALDLQCIIQAATRSNRWNPTFRPF PTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLLEHVELIDRFEGGQLDPYSCSQAFRLRYRSKDRTLSEDKVNPIHEK VRQALVKQFSAELRS
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain
Homologues:
Organism=Escherichia coli, GI1788006, Length=834, Percent_Identity=32.2541966426858, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYFB_PROMM (Q7V7K5)
Other databases:
- EMBL: BX548175 - RefSeq: NP_894570.1 - ProteinModelPortal: Q7V7K5 - SMR: Q7V7K5 - STRING: Q7V7K5 - GeneID: 1728750 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT0738 - NMPDR: fig|74547.1.peg.737 - eggNOG: COG0072 - HOGENOM: HBG399638 - OMA: ADKLRVC - ProtClustDB: PRK00629 - BioCyc: PMAR74547:PMT0738-MONOMER - GO: GO:0005737 - HAMAP: MF_00283 - InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 - Gene3D: G3DSA:3.50.40.10 - Gene3D: G3DSA:3.30.56.20 - Gene3D: G3DSA:3.30.70.380 - Gene3D: G3DSA:2.40.50.140 - SMART: SM00873 - SMART: SM00874 - SMART: SM00896 - TIGRFAMs: TIGR00472
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind
EC number: =6.1.1.20
Molecular weight: Translated: 88975; Mature: 88975
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNAD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC KLSVCQVDVGSGEGLQIVCGAPNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMI CEEEEEEECCCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCCEEEEHHHHCCCCCCCHH CSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDDTVLELAITANRPDGMSMVGI HHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHCCCCHHHEEEEEECCCCCCCHHHHH AREVAALTGASLQLPQLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGELTSPAWL HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHH KQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLRQARNNE HHHHHHCCCCCCCCCEEEEHEEEECCCCCCEEECCHHHHHHCCCCCCCHHHCHHHHCCCC LFNGLDGHQLQLNENCQIVTCHDIPIALAGVMGSAESGVSAKTRRVWLESAMFTPTAVRT CCCCCCCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHH TCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHLGIKSNGCWVYGESPKSAEPVK HHHHHCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHH LRREAIHRLLGPIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPSRRRDLSRE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH VDLIEEVSRLVGFDRFEANLPDPLEPGGLTTAQTAERLLRQMLCGAGLQEVTTLSLVGAD HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEEEECC SDEPQRIAISNPLLAETSHLRTNLWEEHLRICQRNLQSSQPGCWLYEIGNVYTVTDELIN CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHH QRAVLGGVICAERSFERWSTSGKIKSMTYHQARGQLSQVFQGLKLDINDRPLKDNHSLHP HHHHHHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC GRSAELFVEGKLLGDFGQLHPALSERLDLPEATYLFALDLQCIIQAATRSNRWNPTFRPF CCCCEEEEEEEEECCHHHHCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC PTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLLEHVELIDRFEGGQLDPYSCSQAFRL CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYRSKDRTLSEDKVNPIHEKVRQALVKQFSAELRS HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNAD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCC KLSVCQVDVGSGEGLQIVCGAPNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMI CEEEEEEECCCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCCEEEEHHHHCCCCCCCHH CSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDDTVLELAITANRPDGMSMVGI HHHHHCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHCCCCHHHEEEEEECCCCCCCHHHHH AREVAALTGASLQLPQLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGELTSPAWL HHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHH KQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLRQARNNE HHHHHHCCCCCCCCCEEEEHEEEECCCCCCEEECCHHHHHHCCCCCCCHHHCHHHHCCCC LFNGLDGHQLQLNENCQIVTCHDIPIALAGVMGSAESGVSAKTRRVWLESAMFTPTAVRT CCCCCCCCEEEECCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHH TCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHLGIKSNGCWVYGESPKSAEPVK HHHHHCCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHH LRREAIHRLLGPIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPSRRRDLSRE HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHH VDLIEEVSRLVGFDRFEANLPDPLEPGGLTTAQTAERLLRQMLCGAGLQEVTTLSLVGAD HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEEEECC SDEPQRIAISNPLLAETSHLRTNLWEEHLRICQRNLQSSQPGCWLYEIGNVYTVTDELIN CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHH QRAVLGGVICAERSFERWSTSGKIKSMTYHQARGQLSQVFQGLKLDINDRPLKDNHSLHP HHHHHHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC GRSAELFVEGKLLGDFGQLHPALSERLDLPEATYLFALDLQCIIQAATRSNRWNPTFRPF CCCCEEEEEEEEECCHHHHCHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCC PTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLLEHVELIDRFEGGQLDPYSCSQAFRL CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYRSKDRTLSEDKVNPIHEKVRQALVKQFSAELRS HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642