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The map label for this gene is carA [H]

Identifier: 33862926

GI number: 33862926

Start: 707338

End: 708477

Strand: Reverse

Name: carA [H]

Synonym: PMT0653

Alternate gene names: 33862926

Gene position: 708477-707338 (Counterclockwise)

Preceding gene: 33862927

Following gene: 33862925

Centisome position: 29.39

GC content: 53.86

Gene sequence:

>1140_bases
ATGATTGCTTCATCGCGAAATTCGGCGCTCTTGATGCTTGCTGATGGAACGGTGCTTGAGGGGGAGGCCTTTGGTCATTG
CGGTGACGCGATGGGCGAGGTGGTTTTCAACACCGGCATGACGGGCTACCAGGAAGTCCTTACGGATCCCAGTTACTCCG
GTCAGTTGGTCACATTCACCTATCCAGAGTTGGGCAACACAGGCGTAAATCTTGATGATCAAGAATCATCCCGGCCGCAT
GCAAGGGGTGTCATCGCCCGTCAACTCTCCCCAACGCCGAGCAGTTGGCGTTGCCAACAGTCGCTGCAGACTTGGCTGGA
GGAGAAAAGAGTTGTTGGTATCTCAGGTGTTGATACCAGGGCGCTTGTGAGACATCTGCGCGAGGTCGGAGCCATGAATG
GGGTCATAAGCAGCAATGGTTCCACCCCTAAGCAGCTGATGGAACTGTTGCAGCAGGCTCCATCGATGGAGGGATTAAAC
CTTGCAGATCAGGTCTCAACGAAAGATCCATACCGCTGGAGATCAACTTGTGCTGTGGGCTTTGATCAAAGGTTGAAGCA
ACAAATTGATTCGCCCTATCACGTTGTCGCGATTGATTTCGGTATCAAGCGGGCCATACTCGACCGTTTGGTCGCTCACG
GTTGTGAGGTCACCGTCCTGCCGGCCAGTTCAGATTTAGCCACCGTGTTGAGTTCACAACCCGAGGGCGTTTTTCTATCT
AATGGACCTGGTGACCCTGCTGCCGTGACTGGTGGTATTGCCCTGGTTAAAGATCTTCTCAATAAGGTTGATATCCCCCT
GTTTGGCATTTGCCTGGGTCATCAGATTATTGGGCTTGCCATGGGTGGCCGTACTTTCAAATTGGCCTATGGCCATCGCG
GGCTCAACCATCCCTGCGGCACAACGGGGCAGGTGGAGATCACCAGTCAAAACCATGGATTCGCACTTGACGCCTCGTCT
CTGTCACAGGTCAACGTGGTTGTGACCCATCTCAATCTCAATGACCGCACTGTTGCCGCGATAGCGCATCGGGATCGACC
TGTCTTTGGTGTGCAATACCACCCGGAGGCGAGTCCTGGTCCTCATGATGCAGACCACCACTTCGCTCACTTTGTTGAGC
TGATGGCAGATCGTCGCTGA

Upstream 100 bases:

>100_bases
GCAGGAAGGCCTCCCCTGGCAACGGCTAGAAGGGCTCCGCATGGCACTTGATCATCAAATTGGAGAATGAGACTGCGATG
ACTTCGGGATCCTTCTGCTG

Downstream 100 bases:

>100_bases
AGCGTGGTGCGGATCACTCAGTATCACTACACTTCGTGCCATTGCGTCCCGGGGGACTGGTCCCATCACAGAATTGCAGC
GACTGACCGTTTCTCTAAGA

Product: carbamoyl phosphate synthase small subunit

Products: NA

Alternate protein names: Carbamoyl-phosphate synthetase glutamine chain [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MIASSRNSALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNTGVNLDDQESSRPH
ARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTRALVRHLREVGAMNGVISSNGSTPKQLMELLQQAPSMEGLN
LADQVSTKDPYRWRSTCAVGFDQRLKQQIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLS
NGPGDPAAVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMGGRTFKLAYGHRGLNHPCGTTGQVEITSQNHGFALDASS
LSQVNVVVTHLNLNDRTVAAIAHRDRPVFGVQYHPEASPGPHDADHHFAHFVELMADRR

Sequences:

>Translated_379_residues
MIASSRNSALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNTGVNLDDQESSRPH
ARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTRALVRHLREVGAMNGVISSNGSTPKQLMELLQQAPSMEGLN
LADQVSTKDPYRWRSTCAVGFDQRLKQQIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLS
NGPGDPAAVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMGGRTFKLAYGHRGLNHPCGTTGQVEITSQNHGFALDASS
LSQVNVVVTHLNLNDRTVAAIAHRDRPVFGVQYHPEASPGPHDADHHFAHFVELMADRR
>Mature_379_residues
MIASSRNSALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNTGVNLDDQESSRPH
ARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTRALVRHLREVGAMNGVISSNGSTPKQLMELLQQAPSMEGLN
LADQVSTKDPYRWRSTCAVGFDQRLKQQIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLS
NGPGDPAAVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMGGRTFKLAYGHRGLNHPCGTTGQVEITSQNHGFALDASS
LSQVNVVVTHLNLNDRTVAAIAHRDRPVFGVQYHPEASPGPHDADHHFAHFVELMADRR

Specific function: Arginine biosynthesis. Pyrimidine biosynthesis; first step. [C]

COG id: COG0505

COG function: function code EF; Carbamoylphosphate synthase small subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Homo sapiens, GI18105007, Length=381, Percent_Identity=38.5826771653543, Blast_Score=248, Evalue=5e-66,
Organism=Homo sapiens, GI169790915, Length=388, Percent_Identity=35.5670103092784, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI21361331, Length=388, Percent_Identity=35.5670103092784, Blast_Score=220, Evalue=1e-57,
Organism=Escherichia coli, GI1786215, Length=378, Percent_Identity=47.6190476190476, Blast_Score=345, Evalue=2e-96,
Organism=Caenorhabditis elegans, GI193204318, Length=381, Percent_Identity=38.0577427821522, Blast_Score=232, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6324878, Length=387, Percent_Identity=37.4677002583979, Blast_Score=236, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6322331, Length=398, Percent_Identity=35.427135678392, Blast_Score=232, Evalue=6e-62,
Organism=Drosophila melanogaster, GI45555749, Length=385, Percent_Identity=36.6233766233766, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24642586, Length=385, Percent_Identity=36.6233766233766, Blast_Score=219, Evalue=2e-57,

Paralogues:

None

Copy number: 620 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2599 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006220
- InterPro:   IPR001317
- InterPro:   IPR006274
- InterPro:   IPR002474
- InterPro:   IPR011702
- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00988 CPSase_sm_chain; PF00117 GATase [H]

EC number: =6.3.5.5 [H]

Molecular weight: Translated: 40820; Mature: 40820

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASSRNSALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFT
CCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEE
YPELGNTGVNLDDQESSRPHARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHH
ALVRHLREVGAMNGVISSNGSTPKQLMELLQQAPSMEGLNLADQVSTKDPYRWRSTCAVG
HHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHCC
FDQRLKQQIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLS
HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCEEEEE
NGPGDPAAVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMGGRTFKLAYGHRGLNHPCG
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCC
TTGQVEITSQNHGFALDASSLSQVNVVVTHLNLNDRTVAAIAHRDRPVFGVQYHPEASPG
CCCEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCC
PHDADHHFAHFVELMADRR
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIASSRNSALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFT
CCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEE
YPELGNTGVNLDDQESSRPHARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHH
ALVRHLREVGAMNGVISSNGSTPKQLMELLQQAPSMEGLNLADQVSTKDPYRWRSTCAVG
HHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHCC
FDQRLKQQIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLS
HHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCEEEEE
NGPGDPAAVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMGGRTFKLAYGHRGLNHPCG
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCC
TTGQVEITSQNHGFALDASSLSQVNVVVTHLNLNDRTVAAIAHRDRPVFGVQYHPEASPG
CCCEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCC
PHDADHHFAHFVELMADRR
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12917641 [H]