| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862925
Identifier: 33862925
GI number: 33862925
Start: 706908
End: 707207
Strand: Reverse
Name: 33862925
Synonym: PMT0652
Alternate gene names: NA
Gene position: 707207-706908 (Counterclockwise)
Preceding gene: 33862926
Following gene: 33862924
Centisome position: 29.33
GC content: 48.67
Gene sequence:
>300_bases GTGTTCCAGTTCACTGGACAGCTAGACGCTTATTCCGAGAAGCAGTTCATCACCTACGTAGAGGATGTGCTCATGGCCAA TGCTGCTCCTTTGGTTATTGACCTGAACAAGATTGACTTTCTTGACTCTTCTGGTCTAGGGGCTTTGGTTCAAACTGCCA AGAAGTGCACCGATGCCAAACGGTCATTTGCCCTTGTGGGCAATGCAAGGGTCGTCCAAACTGTGAAACTTGTGCGGCTT GAGGATTTTCTCCACCTGGCAGTTGATCTGCGTACGGCTTTAAATCAGTTGAAGGCTTGA
Upstream 100 bases:
>100_bases ACTTCGTGCCATTGCGTCCCGGGGGACTGGTCCCATCACAGAATTGCAGCGACTGACCGTTTCTCTAAGAGGGGGTTTTG AACGTCGGCAGGGTTGTCTG
Downstream 100 bases:
>100_bases ACAATTGGATTCGTAGTCAGTCAGCGATTGGCGGTGCTAATGAACTGGGACCGTTGCAGTTGGCTTGGCTTGGTGATGCT GTTTGGGAATTGCATCAGCG
Product: STAS domain-containing protein
Products: NA
Alternate protein names: Anti-Anti-Sigma Regulatory Factor; STAS Domain-Containing Protein; Anti-Anti-Sigma Regulatory Factor SpoIIAA; Anti-Sigma-Factor Antagonist Domain-Containing Protein; Anti-Anti-Sigma Regulatory Factor RsbV; Anti-Anti-Sigma Factor; Anti-Anti-Sigma Factor Family Protein; Anti-Sigma F Factor Antagonist; Anti-Anti-Sigma Regulatory Factor Spoiiaa; Anti-Sigma F Factor
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MFQFTGQLDAYSEKQFITYVEDVLMANAAPLVIDLNKIDFLDSSGLGALVQTAKKCTDAKRSFALVGNARVVQTVKLVRL EDFLHLAVDLRTALNQLKA
Sequences:
>Translated_99_residues MFQFTGQLDAYSEKQFITYVEDVLMANAAPLVIDLNKIDFLDSSGLGALVQTAKKCTDAKRSFALVGNARVVQTVKLVRL EDFLHLAVDLRTALNQLKA >Mature_99_residues MFQFTGQLDAYSEKQFITYVEDVLMANAAPLVIDLNKIDFLDSSGLGALVQTAKKCTDAKRSFALVGNARVVQTVKLVRL EDFLHLAVDLRTALNQLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10947; Mature: 10947
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQFTGQLDAYSEKQFITYVEDVLMANAAPLVIDLNKIDFLDSSGLGALVQTAKKCTDAK CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RSFALVGNARVVQTVKLVRLEDFLHLAVDLRTALNQLKA HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFQFTGQLDAYSEKQFITYVEDVLMANAAPLVIDLNKIDFLDSSGLGALVQTAKKCTDAK CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RSFALVGNARVVQTVKLVRLEDFLHLAVDLRTALNQLKA HHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA