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The map label for this gene is secF [H]

Identifier: 33862889

GI number: 33862889

Start: 670001

End: 671080

Strand: Reverse

Name: secF [H]

Synonym: PMT0616

Alternate gene names: 33862889

Gene position: 671080-670001 (Counterclockwise)

Preceding gene: 33862890

Following gene: 33862888

Centisome position: 27.84

GC content: 54.91

Gene sequence:

>1080_bases
ATGGCTGTTTCATCATCTTCAGGAACTCGTCAACGCCCACTGAGATTTGAACTTTGTCGTCAACGACGACGAGTTTGGGG
AATCTCAGGCCTGTTTGTGGTTTTGAGTTTGGTGGGATTGATCCTCTGTTGGCTGAACCCTTCGATTGGTGCTCCCCTTC
GTCCAGGACTTGACTTCACTGGTGGAACTCAAATCCAGCTGGAGCGGAGCTGTAGCAAGAGCTGTCAGTCGCTGAAAACC
ACAAGTGTTGAAGAGCTTTTGGGGGCTCTTGAGTTACCCGCTGACAAAGACAAGGTTGCTCCAAACCTCTCACGAGCCAG
GGTTCAGCTTCTTGATGGGGGTCAGTCTCTAGTCTTGAGGTTGCCCTTCCTCTCTGCTGCTCAGGGGCAAGCTGTCATCA
AGGCAATGGATCCTGTAGCGGGTCCGTTTCAGAGTGGTGGTCAATCGGTCGACACCATTGGCCCAAGTCTGGGAGGCCAA
TTGCTGCGCAGCAGCTTGATTTCTCTTTTGGTGGCGTTCACGGGAATCGCTATCTACATCAGCCTCCGTTACGACCGTCG
ATATGCCCTTCTGGCCCTTGTGGCCCTTGCCCATGACGTGATCATTGTTTGTGGGATATTCGCTTGGCTGGGCCTGTTGA
TAACGCTTGAGGTGGATAGCCTCTTCGCGGTAGCGCTGCTCACCATTGCCGGCTACTCGGTCAATGACACTGTGGTGGTC
TTTGACCGGATTCGTGAGCGCAGTCGTGAAGACAACTCACTGCCACTGACGGAACAGGTTGATCGTGCCGTATCCGCGAC
CCTCACAAGGACCCTCTACACCAGCGGTACGACCCTGCTGCCTCTGCTCGCTCTGATCCTCTTTGGCGGTGCAACGCTCT
ACTGGTTTGCGGTTGCACTTGCTCTTGGAGTGGTGGTTGGTAGCTGGTCGAGTATTGCTCTAGCCCCTTCATTGTTGAGC
CTCTGGCAAGGCAGTGGTCCTCCGGCAGGGCCTTTATCAGCCCCTGCTGCTGCTCCACAACCGCCGTTGTCTTCCTCCCA
GCCTCCGATTGAGGGAGGAGATGTGATTTCAGATGGCTGA

Upstream 100 bases:

>100_bases
CACTCGCACTCTGCTGCGTTTTTTGATGGGCTATCAGGCTTTGAGGCGACCTACCAACTTTTTGCCTGCCAAACAGTTGC
CTTCTTCTCTCGCCTGATCC

Downstream 100 bases:

>100_bases
AAGGGCCCGCTCCCGTGGCTTATCTGGCGATCGTTGGTTGCCCGTTCTTCTTTTGGGTCTGTCTCTCTGGGATTTACGAA
CAGAGTTTCTCTTGCTCTGG

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MAVSSSSGTRQRPLRFELCRQRRRVWGISGLFVVLSLVGLILCWLNPSIGAPLRPGLDFTGGTQIQLERSCSKSCQSLKT
TSVEELLGALELPADKDKVAPNLSRARVQLLDGGQSLVLRLPFLSAAQGQAVIKAMDPVAGPFQSGGQSVDTIGPSLGGQ
LLRSSLISLLVAFTGIAIYISLRYDRRYALLALVALAHDVIIVCGIFAWLGLLITLEVDSLFAVALLTIAGYSVNDTVVV
FDRIRERSREDNSLPLTEQVDRAVSATLTRTLYTSGTTLLPLLALILFGGATLYWFAVALALGVVVGSWSSIALAPSLLS
LWQGSGPPAGPLSAPAAAPQPPLSSSQPPIEGGDVISDG

Sequences:

>Translated_359_residues
MAVSSSSGTRQRPLRFELCRQRRRVWGISGLFVVLSLVGLILCWLNPSIGAPLRPGLDFTGGTQIQLERSCSKSCQSLKT
TSVEELLGALELPADKDKVAPNLSRARVQLLDGGQSLVLRLPFLSAAQGQAVIKAMDPVAGPFQSGGQSVDTIGPSLGGQ
LLRSSLISLLVAFTGIAIYISLRYDRRYALLALVALAHDVIIVCGIFAWLGLLITLEVDSLFAVALLTIAGYSVNDTVVV
FDRIRERSREDNSLPLTEQVDRAVSATLTRTLYTSGTTLLPLLALILFGGATLYWFAVALALGVVVGSWSSIALAPSLLS
LWQGSGPPAGPLSAPAAAPQPPLSSSQPPIEGGDVISDG
>Mature_358_residues
AVSSSSGTRQRPLRFELCRQRRRVWGISGLFVVLSLVGLILCWLNPSIGAPLRPGLDFTGGTQIQLERSCSKSCQSLKTT
SVEELLGALELPADKDKVAPNLSRARVQLLDGGQSLVLRLPFLSAAQGQAVIKAMDPVAGPFQSGGQSVDTIGPSLGGQL
LRSSLISLLVAFTGIAIYISLRYDRRYALLALVALAHDVIIVCGIFAWLGLLITLEVDSLFAVALLTIAGYSVNDTVVVF
DRIRERSREDNSLPLTEQVDRAVSATLTRTLYTSGTTLLPLLALILFGGATLYWFAVALALGVVVGSWSSIALAPSLLSL
WQGSGPPAGPLSAPAAAPQPPLSSSQPPIEGGDVISDG

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=316, Percent_Identity=31.0126582278481, Blast_Score=135, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 37901; Mature: 37769

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSSSSGTRQRPLRFELCRQRRRVWGISGLFVVLSLVGLILCWLNPSIGAPLRPGLDFT
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GGTQIQLERSCSKSCQSLKTTSVEELLGALELPADKDKVAPNLSRARVQLLDGGQSLVLR
CCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCEEEEE
LPFLSAAQGQAVIKAMDPVAGPFQSGGQSVDTIGPSLGGQLLRSSLISLLVAFTGIAIYI
CCCCCCCCCHHHHHHHCCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEE
SLRYDRRYALLALVALAHDVIIVCGIFAWLGLLITLEVDSLFAVALLTIAGYSVNDTVVV
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH
FDRIRERSREDNSLPLTEQVDRAVSATLTRTLYTSGTTLLPLLALILFGGATLYWFAVAL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
ALGVVVGSWSSIALAPSLLSLWQGSGPPAGPLSAPAAAPQPPLSSSQPPIEGGDVISDG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVSSSSGTRQRPLRFELCRQRRRVWGISGLFVVLSLVGLILCWLNPSIGAPLRPGLDFT
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GGTQIQLERSCSKSCQSLKTTSVEELLGALELPADKDKVAPNLSRARVQLLDGGQSLVLR
CCCEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCCEEEEE
LPFLSAAQGQAVIKAMDPVAGPFQSGGQSVDTIGPSLGGQLLRSSLISLLVAFTGIAIYI
CCCCCCCCCHHHHHHHCCCCCCHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEE
SLRYDRRYALLALVALAHDVIIVCGIFAWLGLLITLEVDSLFAVALLTIAGYSVNDTVVV
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEH
FDRIRERSREDNSLPLTEQVDRAVSATLTRTLYTSGTTLLPLLALILFGGATLYWFAVAL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
ALGVVVGSWSSIALAPSLLSLWQGSGPPAGPLSAPAAAPQPPLSSSQPPIEGGDVISDG
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]