| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862746
Identifier: 33862746
GI number: 33862746
Start: 525375
End: 526346
Strand: Reverse
Name: 33862746
Synonym: PMT0473
Alternate gene names: NA
Gene position: 526346-525375 (Counterclockwise)
Preceding gene: 33862747
Following gene: 33862743
Centisome position: 21.83
GC content: 51.13
Gene sequence:
>972_bases ATGAAGCAGCGTCTACTAATCATCTCGGCCGTTCAATGGTTGAATGCCGTGATGCGCATGGATGATGCCCCACTATTGGG GGCTTTGAATTTAAAGCGGGAGCATCCTCCAAACCTTCAGTCGCATTATTCAAGTCCATGGGGCACGACAGCTTGGCGGG AAGATGTTCCTGTTAGCGACAGACCGCATCATTTAGAAGTTCATTCACCTTGGGGGCTGTGGACAAGTCGTCGTCTGCGA AAAGGCCATGGACCGCTGGAGCAAGGAAAGTATCGAACCTTGGCTCCGAAGCATATGGTTCAAGCATTACTGCGTGGGAA AGACGTCCATCGTCTTGAAGTGCGAACGGCCTTGGCGTTCATCATTGGTCCGCTGTTGTTCGTTATTAGCAGTGTTTTGC TGATCAACAAACTTGGCTCGGGTGCAGCGCTCTTGGCAATTGGCTCCGTTTTTTTTACGGCAGGAGGTTGGTTTCAGTTG GAACAGGCTTTGTTAGTGACCCGTGGTTTGCTCAATCGGAAGCAGCGCTGGCGCTGGTGTGGAATTTGGTGTGCGCTAAC GCAAAGCATTGGCACCGTTCTTTTCAACATTGAGACATTTTCAACCTGGGGGTTGCCTGCGCTGAATGGAGCACCATGGC TAATGCTGGAGGTTGCTCCCAACATTCTCGGGTCCGTGCTGTTTGTTATTTCGGCGATCTTCGGGCTTCTTGAGGTGGGT CATGGCCGTCTCTTCGTCATACAGCCGCACCATCTTGGTTGGTTGGTGGCTGTTGTGAATGCACTCGGATGTCTGTGGTT TATGCAAGCAGCCATCGCTGCTATTCCTGTAGATTTATCCATAGCCGCTGTGCTTGATCCTCAGGTTGCGATCCGAGCAA CCTTATTGGGAGCCTTAGCTTTTACTGCTGTAGGTGTGCTGAGCCTTGCCGAGTGTAGTGATGATGAGGTTAAGAGCTCA AATTGCATCTAG
Upstream 100 bases:
>100_bases CGCGATTTCTCACGTGAAATGGCTGATCTCCTACTTACCGACATCCGCAACGCCATAACTCATTTCGAGAGTCATCCTGT CAAGATCAGTCTTAACGCTA
Downstream 100 bases:
>100_bases GAGGGTCTTATCTCTTTGCTAATGATCAATAAAGCTTATCTTACTACATAAAAAATCAACTCCTAACTAGAAATTAAACA AGTTTTTTTTCTTTGAAAAA
Product: NADH-ubiquinone/plastoquinone (comple
Products: NA
Alternate protein names: NADH-Ubiquinone/Plastoquinone (Comple
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKQRLLIISAVQWLNAVMRMDDAPLLGALNLKREHPPNLQSHYSSPWGTTAWREDVPVSDRPHHLEVHSPWGLWTSRRLR KGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTALAFIIGPLLFVISSVLLINKLGSGAALLAIGSVFFTAGGWFQL EQALLVTRGLLNRKQRWRWCGIWCALTQSIGTVLFNIETFSTWGLPALNGAPWLMLEVAPNILGSVLFVISAIFGLLEVG HGRLFVIQPHHLGWLVAVVNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSDDEVKSS NCI
Sequences:
>Translated_323_residues MKQRLLIISAVQWLNAVMRMDDAPLLGALNLKREHPPNLQSHYSSPWGTTAWREDVPVSDRPHHLEVHSPWGLWTSRRLR KGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTALAFIIGPLLFVISSVLLINKLGSGAALLAIGSVFFTAGGWFQL EQALLVTRGLLNRKQRWRWCGIWCALTQSIGTVLFNIETFSTWGLPALNGAPWLMLEVAPNILGSVLFVISAIFGLLEVG HGRLFVIQPHHLGWLVAVVNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSDDEVKSS NCI >Mature_323_residues MKQRLLIISAVQWLNAVMRMDDAPLLGALNLKREHPPNLQSHYSSPWGTTAWREDVPVSDRPHHLEVHSPWGLWTSRRLR KGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTALAFIIGPLLFVISSVLLINKLGSGAALLAIGSVFFTAGGWFQL EQALLVTRGLLNRKQRWRWCGIWCALTQSIGTVLFNIETFSTWGLPALNGAPWLMLEVAPNILGSVLFVISAIFGLLEVG HGRLFVIQPHHLGWLVAVVNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALAFTAVGVLSLAECSDDEVKSS NCI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35479; Mature: 35479
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRLLIISAVQWLNAVMRMDDAPLLGALNLKREHPPNLQSHYSSPWGTTAWREDVPVSD CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC RPHHLEVHSPWGLWTSRRLRKGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTALAF CCCEEEEECCCCCHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH IIGPLLFVISSVLLINKLGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRWRWC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GIWCALTQSIGTVLFNIETFSTWGLPALNGAPWLMLEVAPNILGSVLFVISAIFGLLEVG HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC HGRLFVIQPHHLGWLVAVVNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALA CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH FTAVGVLSLAECSDDEVKSSNCI HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKQRLLIISAVQWLNAVMRMDDAPLLGALNLKREHPPNLQSHYSSPWGTTAWREDVPVSD CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC RPHHLEVHSPWGLWTSRRLRKGHGPLEQGKYRTLAPKHMVQALLRGKDVHRLEVRTALAF CCCEEEEECCCCCHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH IIGPLLFVISSVLLINKLGSGAALLAIGSVFFTAGGWFQLEQALLVTRGLLNRKQRWRWC HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GIWCALTQSIGTVLFNIETFSTWGLPALNGAPWLMLEVAPNILGSVLFVISAIFGLLEVG HHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC HGRLFVIQPHHLGWLVAVVNALGCLWFMQAAIAAIPVDLSIAAVLDPQVAIRATLLGALA CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH FTAVGVLSLAECSDDEVKSSNCI HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA